Difference between revisions of "RXN-1104"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=UDPNACETYLMURAMATEDEHYDROG-RXN UDPNACETYLMURAMATEDEHYDROG-RXN] == * direction: ** LEFT-TO-RIGHT * c...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1104 RXN-1104] == * direction: ** LEFT-TO-RIGHT * common name: ** Protein of unknown function D...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=UDPNACETYLMURAMATEDEHYDROG-RXN UDPNACETYLMURAMATEDEHYDROG-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1104 RXN-1104] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** UDP-N-acetylmuramate dehydrogenase
+
** Protein of unknown function DUF858, methyltransferase-like
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.3.1.98 EC-1.3.1.98]
+
** [http://enzyme.expasy.org/EC/2.1.1.68 EC-2.1.1.68]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[NADPH]][c] '''+''' 1 [[UDP-ACETYL-CARBOXYVINYL-GLUCOSAMINE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[UDP-N-ACETYLMURAMATE]][c] '''+''' 1 [[NADP]][c]
+
** 1 [[CPD-676]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[FERULIC-ACID]][c] '''+''' 1 [[PROTON]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 NADPH[c] '''+''' 1 UDP-N-acetyl-α-D-glucosamine-enolpyruvate[c] '''+''' 1 H+[c] '''=>''' 1 UDP-N-acetyl-α-D-muramate[c] '''+''' 1 NADP+[c]
+
** 1 trans-caffeate[c] '''+''' 1 S-adenosyl-L-methionine[c] '''=>''' 1 S-adenosyl-L-homocysteine[c] '''+''' 1 ferulate[c] '''+''' 1 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-03_000480]]
+
* Gene: [[Ec-01_004720]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***GO-TERM
+
*** Assignment: EC-NUMBER
−
* [[Ec-16_002060]]
+
−
** ESILICULOSUS_GENOME
+
−
***GO-TERM
+
−
* [[Ec-03_000110]]
+
−
** ESILICULOSUS_GENOME
+
−
***GO-TERM
+
−
* [[Ec-21_001860]]
+
−
** ESILICULOSUS_GENOME
+
−
***GO-TERM
+
−
* [[Ec-09_002930]]
+
−
** ESILICULOSUS_GENOME
+
−
***GO-TERM
+
−
* [[Ec-26_003750]]
+
−
** ESILICULOSUS_GENOME
+
−
***GO-TERM
+
−
* [[Ec-19_003080]]
+
−
** ESILICULOSUS_GENOME
+
−
***GO-TERM
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6386]], UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6386 PWY-6386]
+
* [[PWY-2181]], free phenylpropanoid acid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2181 PWY-2181]
−
** '''1''' reactions found over '''8''' reactions in the full pathway
+
** '''3''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-6387]], UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6387 PWY-6387]
+
* [[PWY-7186]], superpathway of scopolin and esculin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7186 PWY-7186]
−
** '''1''' reactions found over '''8''' reactions in the full pathway
+
** '''1''' reactions found over '''14''' reactions in the full pathway
 +
* [[PWY-1121]], suberin monomers biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-1121 PWY-1121]
 +
** '''6''' reactions found over '''19''' reactions in the full pathway
 +
* [[PWY-7498]], phenylpropanoids methylation (ice plant): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7498 PWY-7498]
 +
** '''2''' reactions found over '''10''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
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== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12248 12248]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20225 20225]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R03192 R03192]
+
** [http://www.genome.jp/dbget-bin/www_bget?R03366 R03366]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/Q9PM01 Q9PM01]
+
** [http://www.uniprot.org/uniprot/Q41086 Q41086]
−
** [http://www.uniprot.org/uniprot/Q9JV28 Q9JV28]
+
** [http://www.uniprot.org/uniprot/P28002 P28002]
−
** [http://www.uniprot.org/uniprot/P44605 P44605]
+
** [http://www.uniprot.org/uniprot/Q00763 Q00763]
−
** [http://www.uniprot.org/uniprot/P08373 P08373]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=UDP-N-acetylmuramate dehydrogenase}}
+
{{#set: common name=Protein of unknown function DUF858, methyltransferase-like}}
−
{{#set: ec number=EC-1.3.1.98}}
+
{{#set: ec number=EC-2.1.1.68}}
−
{{#set: gene associated=Ec-03_000480|Ec-16_002060|Ec-03_000110|Ec-21_001860|Ec-09_002930|Ec-26_003750|Ec-19_003080}}
+
{{#set: gene associated=Ec-01_004720}}
−
{{#set: in pathway=PWY-6386|PWY-6387}}
+
{{#set: in pathway=PWY-2181|PWY-7186|PWY-1121|PWY-7498}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:37, 21 March 2018

Reaction RXN-1104

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Protein of unknown function DUF858, methyltransferase-like
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-2181, free phenylpropanoid acid biosynthesis: PWY-2181
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-7186, superpathway of scopolin and esculin biosynthesis: PWY-7186
    • 1 reactions found over 14 reactions in the full pathway
  • PWY-1121, suberin monomers biosynthesis: PWY-1121
    • 6 reactions found over 19 reactions in the full pathway
  • PWY-7498, phenylpropanoids methylation (ice plant): PWY-7498
    • 2 reactions found over 10 reactions in the full pathway

Reconstruction information

External links





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