Difference between revisions of "Ec-11 005620"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RIBOFLAVINKIN-RXN RIBOFLAVINKIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** riboflavin...")
 
(Created page with "Category:Gene == Gene Ec-11_005620 == * left end position: ** 5589282 * transcription direction: ** POSITIVE * right end position: ** 5591911 * centisome position: ** 88.8...")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RIBOFLAVINKIN-RXN RIBOFLAVINKIN-RXN] ==
+
== Gene Ec-11_005620 ==
−
* direction:
+
* left end position:
−
** LEFT-TO-RIGHT
+
** 5589282
−
* common name:
+
* transcription direction:
−
** riboflavin kinase
+
** POSITIVE
−
* ec number:
+
* right end position:
−
** [http://enzyme.expasy.org/EC/2.7.1.26 EC-2.7.1.26]
+
** 5591911
 +
* centisome position:
 +
** 88.86464   
 
* Synonym(s):
 
* Synonym(s):
 +
** Esi_0031_0047
 +
** Esi0031_0047
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[NAD+-ADP-RIBOSYLTRANSFERASE-RXN]]
−
** 1 [[ATP]][c] '''+''' 1 [[RIBOFLAVIN]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[FMN]][c]
+
** Source: [[annotation-esiliculosus_genome]]
−
* With common name(s):
+
*** Assignment: go-term
−
** 1 ATP[c] '''+''' 1 riboflavin[c] '''=>''' 1 H+[c] '''+''' 1 ADP[c] '''+''' 1 FMN[c]
+
== Pathways associated ==
−
 
+
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* [[Ec-04_004280]]
+
−
** ESILICULOSUS_GENOME
+
−
***GO-TERM
+
−
* [[Ec-14_005260]]
+
−
** ESILICULOSUS_GENOME
+
−
***GO-TERM
+
−
* [[Ec-10_002950]]
+
−
** ESILICULOSUS_GENOME
+
−
***GO-TERM
+
−
* [[Ec-04_001490]]
+
−
** [[pantograph]]-[[aragem]]
+
−
== Pathways  ==
+
−
* [[PWY66-366]], flavin biosynthesis IV (mammalian): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-366 PWY66-366]
+
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
−
* [[PWY-6168]], flavin biosynthesis III (fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6168 PWY-6168]
+
−
** '''6''' reactions found over '''9''' reactions in the full pathway
+
−
* [[RIBOSYN2-PWY]], flavin biosynthesis I (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=RIBOSYN2-PWY RIBOSYN2-PWY]
+
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
−
* [[PWY-5523]], 5,6-dimethylbenzimidazole biosynthesis I (aerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5523 PWY-5523]
+
−
** '''1''' reactions found over '''3''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* [[orthology]]:
+
−
** [[pantograph]]:
+
−
*** [[aragem]]
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[esiliculosus_genome]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: left end position=5589282}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14357 14357]
+
{{#set: transcription direction=POSITIVE}}
−
* LIGAND-RXN:
+
{{#set: right end position=5591911}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R00549 R00549]
+
{{#set: centisome position=88.86464    }}
−
* UNIPROT:
+
{{#set: common name=Esi_0031_0047|Esi0031_0047}}
−
** [http://www.uniprot.org/uniprot/Q9JVY5 Q9JVY5]
+
{{#set: reaction associated=NAD+-ADP-RIBOSYLTRANSFERASE-RXN}}
−
** [http://www.uniprot.org/uniprot/Q9PHS7 Q9PHS7]
+
−
** [http://www.uniprot.org/uniprot/Q59263 Q59263]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=riboflavin kinase}}
+
−
{{#set: ec number=EC-2.7.1.26}}
+
−
{{#set: gene associated=Ec-04_004280|Ec-14_005260|Ec-10_002950|Ec-04_001490}}
+
−
{{#set: in pathway=PWY66-366|PWY-6168|RIBOSYN2-PWY|PWY-5523}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=aragem}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=esiliculosus_genome}}
+

Latest revision as of 19:37, 21 March 2018

Gene Ec-11_005620

  • left end position:
    • 5589282
  • transcription direction:
    • POSITIVE
  • right end position:
    • 5591911
  • centisome position:
    • 88.86464
  • Synonym(s):
    • Esi_0031_0047
    • Esi0031_0047

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-11_005620&oldid=28221"