Difference between revisions of "Ec-24 002140"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=UDPNACETYLMURAMATEDEHYDROG-RXN UDPNACETYLMURAMATEDEHYDROG-RXN] == * direction: ** LEFT-TO-RIGHT * c...")
 
(Created page with "Category:Gene == Gene Ec-24_002140 == * left end position: ** 2479674 * transcription direction: ** POSITIVE * right end position: ** 2483269 * centisome position: ** 49.7...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=UDPNACETYLMURAMATEDEHYDROG-RXN UDPNACETYLMURAMATEDEHYDROG-RXN] ==
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== Gene Ec-24_002140 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 2479674
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* common name:
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* transcription direction:
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** UDP-N-acetylmuramate dehydrogenase
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/1.3.1.98 EC-1.3.1.98]
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** 2483269
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* centisome position:
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** 49.71606   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0060_0077
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** Esi0060_0077
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** CYP5164A1P
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[RXN-3661]]
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** 1 [[UDP-ACETYL-CARBOXYVINYL-GLUCOSAMINE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[NADPH]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[UDP-N-ACETYLMURAMATE]][c]
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** Source: [[orthology-aragem]]
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* With common name(s):
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* Reaction: [[RXN-8038]]
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** 1 UDP-N-acetyl-α-D-glucosamine-enolpyruvate[c] '''+''' 1 H+[c] '''+''' 1 NADPH[c] '''=>''' 1 NADP+[c] '''+''' 1 UDP-N-acetyl-α-D-muramate[c]
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** Source: [[orthology-aragem]]
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* Reaction: [[RXN-8040]]
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== Genes associated with this reaction  ==
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** Source: [[orthology-aragem]]
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN1F-147]]
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* [[Ec-03_000480]]
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** Source: [[orthology-aragem]]
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** ESILICULOSUS_GENOME
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* Reaction: [[RXN1F-148]]
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***GO-TERM
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** Source: [[orthology-aragem]]
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* [[Ec-26_003750]]
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* Reaction: [[RXN1F-150]]
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** ESILICULOSUS_GENOME
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** Source: [[orthology-aragem]]
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***GO-TERM
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* Reaction: [[RXN1F-151]]
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* [[Ec-09_002930]]
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** Source: [[orthology-aragem]]
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** ESILICULOSUS_GENOME
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* Reaction: [[UNSPECIFIC-MONOOXYGENASE-RXN]]
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***GO-TERM
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** Source: [[annotation-esiliculosus_genome]]
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* [[Ec-21_001860]]
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*** Assignment: automated-name-match
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** ESILICULOSUS_GENOME
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== Pathways associated ==
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***GO-TERM
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* [[PWY-5640]]
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* [[Ec-03_000110]]
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* [[PWY-5946]]
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** ESILICULOSUS_GENOME
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* [[PWY-5943]]
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***GO-TERM
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* [[PWY-5947]]
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* [[Ec-16_002060]]
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* [[PWY-7591]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-19_003080]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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== Pathways ==
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* [[PWY-6386]], UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6386 PWY-6386]
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** '''1''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-6387]], UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6387 PWY-6387]
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** '''1''' reactions found over '''8''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[esiliculosus_genome]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=2479674}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12248 12248]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=2483269}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03192 R03192]
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{{#set: centisome position=49.71606    }}
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* UNIPROT:
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{{#set: common name=Esi_0060_0077|Esi0060_0077|CYP5164A1P}}
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** [http://www.uniprot.org/uniprot/Q9PM01 Q9PM01]
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{{#set: reaction associated=RXN-3661|RXN-8038|RXN-8040|RXN1F-147|RXN1F-148|RXN1F-150|RXN1F-151|UNSPECIFIC-MONOOXYGENASE-RXN}}
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** [http://www.uniprot.org/uniprot/Q9JV28 Q9JV28]
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{{#set: pathway associated=PWY-5640|PWY-5946|PWY-5943|PWY-5947|PWY-7591}}
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** [http://www.uniprot.org/uniprot/P44605 P44605]
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** [http://www.uniprot.org/uniprot/P08373 P08373]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=UDP-N-acetylmuramate dehydrogenase}}
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{{#set: ec number=EC-1.3.1.98}}
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{{#set: gene associated=Ec-03_000480|Ec-26_003750|Ec-09_002930|Ec-21_001860|Ec-03_000110|Ec-16_002060|Ec-19_003080}}
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{{#set: in pathway=PWY-6386|PWY-6387}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=esiliculosus_genome}}
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Latest revision as of 19:37, 21 March 2018

Gene Ec-24_002140

  • left end position:
    • 2479674
  • transcription direction:
    • POSITIVE
  • right end position:
    • 2483269
  • centisome position:
    • 49.71606
  • Synonym(s):
    • Esi_0060_0077
    • Esi0060_0077
    • CYP5164A1P

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-24_002140&oldid=28233"