Difference between revisions of "Ec-21 006220"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ARGSUCCINSYN-RXN ARGSUCCINSYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** argininosucci...")
 
(Created page with "Category:Gene == Gene Ec-21_006220 == * left end position: ** 7084129 * transcription direction: ** NEGATIVE * right end position: ** 7089373 * centisome position: ** 95.9...")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ARGSUCCINSYN-RXN ARGSUCCINSYN-RXN] ==
+
== Gene Ec-21_006220 ==
−
* direction:
+
* left end position:
−
** LEFT-TO-RIGHT
+
** 7084129
−
* common name:
+
* transcription direction:
−
** argininosuccinate synthetase
+
** NEGATIVE
−
* ec number:
+
* right end position:
−
** [http://enzyme.expasy.org/EC/6.3.4.5 EC-6.3.4.5]
+
** 7089373
 +
* centisome position:
 +
** 95.98936   
 
* Synonym(s):
 
* Synonym(s):
 +
** Esi_0014_0172
 +
** Esi0014_0172
 +
** GGT
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[GAMMA-GLUTAMYLTRANSFERASE-RXN]]
−
** 1 [[ATP]][c] '''+''' 1 [[L-ASPARTATE]][c] '''+''' 1 [[L-CITRULLINE]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[L-ARGININO-SUCCINATE]][c] '''+''' 1 [[AMP]][c]
+
** Source: [[annotation-esiliculosus_genome]]
−
* With common name(s):
+
*** Assignment: ec-number
−
** 1 ATP[c] '''+''' 1 L-aspartate[c] '''+''' 1 L-citrulline[c] '''=>''' 1 diphosphate[c] '''+''' 1 H+[c] '''+''' 1 L-arginino-succinate[c] '''+''' 1 AMP[c]
+
* Reaction: [[RXN-6601]]
−
 
+
** Source: [[annotation-esiliculosus_genome]]
−
== Genes associated with this reaction  ==
+
*** Assignment: ec-number
−
Genes have been associated with this reaction based on different elements listed below.
+
* Reaction: [[RXN-9157]]
−
* [[Ec-01_001870]]
+
** Source: [[annotation-esiliculosus_genome]]
−
** ESILICULOSUS_GENOME
+
*** Assignment: ec-number
−
***EC-NUMBER
+
* Reaction: [[RXN66-336]]
−
** [[pantograph]]-[[aragem]]
+
** Source: [[annotation-esiliculosus_genome]]
−
== Pathways  ==
+
*** Assignment: ec-number
−
* [[PWY-5154]], L-arginine biosynthesis III (via N-acetyl-L-citrulline): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5154 PWY-5154]
+
== Pathways associated ==
−
** '''7''' reactions found over '''9''' reactions in the full pathway
+
* [[PWY-4041]]
−
* [[ARGSYN-PWY]], L-arginine biosynthesis I (via L-ornithine): [http://metacyc.org/META/NEW-IMAGE?object=ARGSYN-PWY ARGSYN-PWY]
+
* [[PWY-5826]]
−
** '''5''' reactions found over '''6''' reactions in the full pathway
+
* [[PWY66-375]]
−
* [[PWY-4984]], urea cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4984 PWY-4984]
+
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
−
* [[ARGSYNBSUB-PWY]], L-arginine biosynthesis II (acetyl cycle): [http://metacyc.org/META/NEW-IMAGE?object=ARGSYNBSUB-PWY ARGSYNBSUB-PWY]
+
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
−
* [[PWY-4983]], L-citrulline-nitric oxide cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4983 PWY-4983]
+
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
−
* [[PWY-7400]], L-arginine biosynthesis IV (archaebacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7400 PWY-7400]
+
−
** '''7''' reactions found over '''9''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* [[orthology]]:
+
−
** [[pantograph]]:
+
−
*** [[aragem]]
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[esiliculosus_genome]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: left end position=7084129}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10932 10932]
+
{{#set: transcription direction=NEGATIVE}}
−
* LIGAND-RXN:
+
{{#set: right end position=7089373}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R01954 R01954]
+
{{#set: centisome position=95.98936    }}
−
* UNIPROT:
+
{{#set: common name=Esi_0014_0172|Esi0014_0172|GGT}}
−
** [http://www.uniprot.org/uniprot/P22768 P22768]
+
{{#set: reaction associated=GAMMA-GLUTAMYLTRANSFERASE-RXN|RXN-6601|RXN-9157|RXN66-336}}
−
** [http://www.uniprot.org/uniprot/P0A6E4 P0A6E4]
+
{{#set: pathway associated=PWY-4041|PWY-5826|PWY66-375}}
−
** [http://www.uniprot.org/uniprot/P00966 P00966]
+
−
** [http://www.uniprot.org/uniprot/P16460 P16460]
+
−
** [http://www.uniprot.org/uniprot/P13256 P13256]
+
−
** [http://www.uniprot.org/uniprot/P13257 P13257]
+
−
** [http://www.uniprot.org/uniprot/P09034 P09034]
+
−
** [http://www.uniprot.org/uniprot/P24532 P24532]
+
−
** [http://www.uniprot.org/uniprot/Q9PHK7 Q9PHK7]
+
−
** [http://www.uniprot.org/uniprot/P57799 P57799]
+
−
** [http://www.uniprot.org/uniprot/Q60174 Q60174]
+
−
** [http://www.uniprot.org/uniprot/P44315 P44315]
+
−
** [http://www.uniprot.org/uniprot/Q9JWM1 Q9JWM1]
+
−
** [http://www.uniprot.org/uniprot/P50986 P50986]
+
−
** [http://www.uniprot.org/uniprot/Q06734 Q06734]
+
−
** [http://www.uniprot.org/uniprot/P0C1A1 P0C1A1]
+
−
** [http://www.uniprot.org/uniprot/Q59491 Q59491]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=argininosuccinate synthetase}}
+
−
{{#set: ec number=EC-6.3.4.5}}
+
−
{{#set: gene associated=Ec-01_001870}}
+
−
{{#set: in pathway=PWY-5154|ARGSYN-PWY|PWY-4984|ARGSYNBSUB-PWY|PWY-4983|PWY-7400}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=aragem}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=esiliculosus_genome}}
+

Latest revision as of 20:37, 21 March 2018

Gene Ec-21_006220

  • left end position:
    • 7084129
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 7089373
  • centisome position:
    • 95.98936
  • Synonym(s):
    • Esi_0014_0172
    • Esi0014_0172
    • GGT

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-21_006220&oldid=28255"