Difference between revisions of "Ec-28 002930"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1104 RXN-1104] == * direction: ** LEFT-TO-RIGHT * common name: ** Protein of unknown function D...")
 
(Created page with "Category:Gene == Gene Ec-28_002930 == * left end position: ** 2712251 * transcription direction: ** POSITIVE * right end position: ** 2717662 * centisome position: ** 71.5...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1104 RXN-1104] ==
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== Gene Ec-28_002930 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 2712251
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* common name:
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* transcription direction:
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** Protein of unknown function DUF858, methyltransferase-like
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/2.1.1.68 EC-2.1.1.68]
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** 2717662
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* centisome position:
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** 71.581856   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0009_0147
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** Esi0009_0147
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[RXN0-2023]]
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** 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[CPD-676]][c] '''=>''' 1 [[FERULIC-ACID]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[PROTON]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 1 S-adenosyl-L-methionine[c] '''+''' 1 trans-caffeate[c] '''=>''' 1 ferulate[c] '''+''' 1 S-adenosyl-L-homocysteine[c] '''+''' 1 H+[c]
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== Pathways associated ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-01_004720]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-2181]], free phenylpropanoid acid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2181 PWY-2181]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-1121]], suberin monomers biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-1121 PWY-1121]
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** '''6''' reactions found over '''19''' reactions in the full pathway
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* [[PWY-7498]], phenylpropanoids methylation (ice plant): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7498 PWY-7498]
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** '''2''' reactions found over '''10''' reactions in the full pathway
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* [[PWY-7186]], superpathway of scopolin and esculin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7186 PWY-7186]
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** '''1''' reactions found over '''14''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[esiliculosus_genome]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=2712251}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20225 20225]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=2717662}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03366 R03366]
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{{#set: centisome position=71.581856    }}
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* UNIPROT:
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{{#set: common name=Esi_0009_0147|Esi0009_0147}}
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** [http://www.uniprot.org/uniprot/Q41086 Q41086]
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{{#set: reaction associated=RXN0-2023}}
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** [http://www.uniprot.org/uniprot/P28002 P28002]
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** [http://www.uniprot.org/uniprot/Q00763 Q00763]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Protein of unknown function DUF858, methyltransferase-like}}
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{{#set: ec number=EC-2.1.1.68}}
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{{#set: gene associated=Ec-01_004720}}
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{{#set: in pathway=PWY-2181|PWY-1121|PWY-7498|PWY-7186}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=esiliculosus_genome}}
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Latest revision as of 20:37, 21 March 2018

Gene Ec-28_002930

  • left end position:
    • 2712251
  • transcription direction:
    • POSITIVE
  • right end position:
    • 2717662
  • centisome position:
    • 71.581856
  • Synonym(s):
    • Esi_0009_0147
    • Esi0009_0147

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-28_002930&oldid=28270"