Difference between revisions of "RXN-15556"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.1.1.178-RXN 1.1.1.178-RXN] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expasy.or...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15556 RXN-15556] == * direction: ** LEFT-TO-RIGHT * common name: ** Ubiquitin-conjugating enzym...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.1.1.178-RXN 1.1.1.178-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15556 RXN-15556] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 +
* common name:
 +
** Ubiquitin-conjugating enzyme E2
 +
** Ubiquitin-activating enzyme e1, C-terminal
 +
** Putative ubiquitin-conjugating enzyme E2
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.1.1.178 EC-1.1.1.178]
+
** [http://enzyme.expasy.org/EC/2.3.2.23 EC-2.3.2.23]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[NAD]][c] '''+''' 1 [[2-METHYL-3-HYDROXY-BUTYRYL-COA]][c] '''<=>''' 1 [[PROTON]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[2-METHYL-ACETO-ACETYL-COA]][c]
+
** 1 [[S-ubiquitinyl-UAP-E1-L-cysteine]][c] '''+''' 1 [[Ubiquitin-carrier-protein-E2-L-cysteine]][c] '''=>''' 1 [[S-ubiquitinyl-UCP-E2-L-cysteine]][c] '''+''' 1 [[Ubiquitin-activating-protein-E1-L-cys]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 NAD+[c] '''+''' 1 (2S,3S)-3-hydroxy-2-methylbutanoyl-CoA[c] '''<=>''' 1 H+[c] '''+''' 1 NADH[c] '''+''' 1 2-methylacetoacetyl-CoA[c]
+
** 1 an S-ubiquitinyl-[E1 ubiquitin-activating enzyme]-L-cysteine[c] '''+''' 1 an [E2 ubiquitin-conjugating enzyme]-L-cysteine[c] '''=>''' 1 an S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine[c] '''+''' 1 an [E1 ubiquitin-activating enzyme]-L-cysteine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Ec-13_002970]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-14_005080]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-10_003200]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-08_003600]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-08_005090]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-28_000490]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-26_004480]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-12_005810]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-08_005320]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-09_003260]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-00_001460]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-09_004750]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-08_002220]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-16_005210]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5109]], 2-methylbutanoate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5109 PWY-5109]
+
* [[PWY-7511]], protein ubiquitylation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7511 PWY-7511]
−
** '''4''' reactions found over '''6''' reactions in the full pathway
+
** '''9''' reactions found over '''9''' reactions in the full pathway
−
* [[ILEUDEG-PWY]], L-isoleucine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=ILEUDEG-PWY ILEUDEG-PWY]
+
−
** '''6''' reactions found over '''6''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
Line 24: Line 69:
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: direction=LEFT-TO-RIGHT}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13281 13281]
+
{{#set: common name=Ubiquitin-conjugating enzyme E2}}
−
* LIGAND-RXN:
+
{{#set: common name=Ubiquitin-activating enzyme e1, C-terminal}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R04203 R04203]
+
{{#set: common name=Putative ubiquitin-conjugating enzyme E2}}
−
{{#set: direction=REVERSIBLE}}
+
{{#set: ec number=EC-2.3.2.23}}
−
{{#set: ec number=EC-1.1.1.178}}
+
{{#set: gene associated=Ec-13_002970|Ec-14_005080|Ec-10_003200|Ec-08_003600|Ec-08_005090|Ec-28_000490|Ec-26_004480|Ec-12_005810|Ec-08_005320|Ec-09_003260|Ec-00_001460|Ec-09_004750|Ec-08_002220|Ec-16_005210}}
−
{{#set: in pathway=PWY-5109|ILEUDEG-PWY}}
+
{{#set: in pathway=PWY-7511}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:37, 21 March 2018

Reaction RXN-15556

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Ubiquitin-conjugating enzyme E2
    • Ubiquitin-activating enzyme e1, C-terminal
    • Putative ubiquitin-conjugating enzyme E2
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7511, protein ubiquitylation: PWY-7511
    • 9 reactions found over 9 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-15556&oldid=28281"