Difference between revisions of "RXN-15556"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13697 RXN-13697] == * direction: ** REVERSIBLE * common name: ** Aspartate Aminotransferase **...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15556 RXN-15556] == * direction: ** LEFT-TO-RIGHT * common name: ** Ubiquitin-conjugating enzym...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13697 RXN-13697] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15556 RXN-15556] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Aspartate Aminotransferase
+
** Ubiquitin-conjugating enzyme E2
−
** Pyridoxal phosphate-dependent transferase, major region, subdomain 1
+
** Ubiquitin-activating enzyme e1, C-terminal
−
** aspartate aminotransferase
+
** Putative ubiquitin-conjugating enzyme E2
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.6.1.1 EC-2.6.1.1]
+
** [http://enzyme.expasy.org/EC/2.3.2.23 EC-2.3.2.23]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[L-ASPARTATE]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''<=>''' 1 [[OXALACETIC_ACID]][c] '''+''' 1 [[GLT]][c]
+
** 1 [[S-ubiquitinyl-UAP-E1-L-cysteine]][c] '''+''' 1 [[Ubiquitin-carrier-protein-E2-L-cysteine]][c] '''=>''' 1 [[S-ubiquitinyl-UCP-E2-L-cysteine]][c] '''+''' 1 [[Ubiquitin-activating-protein-E1-L-cys]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 L-aspartate[c] '''+''' 1 2-oxoglutarate[c] '''<=>''' 1 oxaloacetate[c] '''+''' 1 L-glutamate[c]
+
** 1 an S-ubiquitinyl-[E1 ubiquitin-activating enzyme]-L-cysteine[c] '''+''' 1 an [E2 ubiquitin-conjugating enzyme]-L-cysteine[c] '''=>''' 1 an S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine[c] '''+''' 1 an [E1 ubiquitin-activating enzyme]-L-cysteine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-01_007480]]
+
* Gene: [[Ec-13_002970]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***EC-NUMBER
+
*** Assignment: AUTOMATED-NAME-MATCH
−
* [[Ec-03_003270]]
+
* Gene: [[Ec-14_005080]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***EC-NUMBER
+
*** Assignment: AUTOMATED-NAME-MATCH
−
* [[Ec-23_003500]]
+
* Gene: [[Ec-10_003200]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***EC-NUMBER
+
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-08_003600]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-08_005090]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-28_000490]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-26_004480]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-12_005810]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-08_005320]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-09_003260]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-00_001460]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-09_004750]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-08_002220]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-16_005210]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7117]], C4 photosynthetic carbon assimilation cycle, PEPCK type: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7117 PWY-7117]
+
* [[PWY-7511]], protein ubiquitylation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7511 PWY-7511]
−
** '''9''' reactions found over '''10''' reactions in the full pathway
+
−
* [[PWY-7115]], C4 photosynthetic carbon assimilation cycle, NAD-ME type: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7115 PWY-7115]
+
 
** '''9''' reactions found over '''9''' reactions in the full pathway
 
** '''9''' reactions found over '''9''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[annotation]]
−
** [[pathwaytools]]:
+
** Source: [[annotation-esiliculosus_genome]]
−
*** [[esiliculosus_genome]]
+
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=REVERSIBLE}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Aspartate Aminotransferase}}
+
{{#set: common name=Ubiquitin-conjugating enzyme E2}}
−
{{#set: common name=Pyridoxal phosphate-dependent transferase, major region, subdomain 1}}
+
{{#set: common name=Ubiquitin-activating enzyme e1, C-terminal}}
−
{{#set: common name=aspartate aminotransferase}}
+
{{#set: common name=Putative ubiquitin-conjugating enzyme E2}}
−
{{#set: ec number=EC-2.6.1.1}}
+
{{#set: ec number=EC-2.3.2.23}}
−
{{#set: gene associated=Ec-01_007480|Ec-03_003270|Ec-23_003500}}
+
{{#set: gene associated=Ec-13_002970|Ec-14_005080|Ec-10_003200|Ec-08_003600|Ec-08_005090|Ec-28_000490|Ec-26_004480|Ec-12_005810|Ec-08_005320|Ec-09_003260|Ec-00_001460|Ec-09_004750|Ec-08_002220|Ec-16_005210}}
−
{{#set: in pathway=PWY-7117|PWY-7115}}
+
{{#set: in pathway=PWY-7511}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=esiliculosus_genome}}
 

Latest revision as of 19:37, 21 March 2018

Reaction RXN-15556

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Ubiquitin-conjugating enzyme E2
    • Ubiquitin-activating enzyme e1, C-terminal
    • Putative ubiquitin-conjugating enzyme E2
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7511, protein ubiquitylation: PWY-7511
    • 9 reactions found over 9 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-15556&oldid=28281"