Difference between revisions of "NARINGENIN-CHALCONE-SYNTHASE-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=4-HYDROXYPHENYLPYRUVATE-DIOXYGENASE-RXN 4-HYDROXYPHENYLPYRUVATE-DIOXYGENASE-RXN] == * direction: **...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=NARINGENIN-CHALCONE-SYNTHASE-RXN NARINGENIN-CHALCONE-SYNTHASE-RXN] == * direction: ** LEFT-TO-RIGHT...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=4-HYDROXYPHENYLPYRUVATE-DIOXYGENASE-RXN 4-HYDROXYPHENYLPYRUVATE-DIOXYGENASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=NARINGENIN-CHALCONE-SYNTHASE-RXN NARINGENIN-CHALCONE-SYNTHASE-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
 
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.13.11.27 EC-1.13.11.27]
+
** [http://enzyme.expasy.org/EC/2.3.1.74 EC-2.3.1.74]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[P-HYDROXY-PHENYLPYRUVATE]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[HOMOGENTISATE]][c]
+
** 1 [[P-COUMAROYL-COA]][c] '''+''' 3 [[PROTON]][c] '''+''' 3 [[MALONYL-COA]][c] '''=>''' 4 [[CO-A]][c] '''+''' 1 [[APIGENIN]][c] '''+''' 3 [[CARBON-DIOXIDE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 oxygen[c] '''+''' 1 4-hydroxyphenylpyruvate[c] '''=>''' 1 CO2[c] '''+''' 1 homogentisate[c]
+
** 1 4-coumaroyl-CoA[c] '''+''' 3 H+[c] '''+''' 3 malonyl-CoA[c] '''=>''' 4 coenzyme A[c] '''+''' 1 2',4,4',6'-tetrahydroxychalcone[c] '''+''' 3 CO2[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-23_003630]]
+
* Gene: [[Ec-07_006660]]
−
** ESILICULOSUS_GENOME
+
** Source: [[orthology-aragem]]
−
***EC-NUMBER
+
* Gene: [[Ec-02_004580]]
−
** [[pantograph]]-[[aragem]]
+
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-07_003670]]
 +
** Source: [[orthology-aragem]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-1581]], plastoquinol-9 biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-1581 PWY-1581]
+
* [[PWY1F-FLAVSYN]], flavonoid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY1F-FLAVSYN PWY1F-FLAVSYN]
−
** '''1''' reactions found over '''3''' reactions in the full pathway
+
** '''5''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-7432]], L-phenylalanine biosynthesis III (cytosolic, plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7432 PWY-7432]
+
* [[PWY-6316]], aromatic polyketides biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6316 PWY-6316]
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[TYRFUMCAT-PWY]], L-tyrosine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=TYRFUMCAT-PWY TYRFUMCAT-PWY]
+
* [[PWY-7397]], naringenin biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7397 PWY-7397]
−
** '''3''' reactions found over '''5''' reactions in the full pathway
+
** '''3''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-1422]], vitamin E biosynthesis (tocopherols): [http://metacyc.org/META/NEW-IMAGE?object=PWY-1422 PWY-1422]
+
* [[PWY-5135]], xanthohumol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5135 PWY-5135]
−
** '''7''' reactions found over '''7''' reactions in the full pathway
+
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-6787]], flavonoid biosynthesis (in equisetum): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6787 PWY-6787]
 +
** '''6''' reactions found over '''10''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
 
** Source: [[orthology-aragem]]
 
** Source: [[orthology-aragem]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
−
* Category: [[annotation]]
 
−
** Source: [[annotation-esiliculosus_genome]]
 
−
*** Tool: [[pathwaytools]]
 
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16189 16189]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11128 11128]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R02521 R02521]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01613 R01613]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P32754 P32754]
+
** [http://www.uniprot.org/uniprot/Q43188 Q43188]
−
** [http://www.uniprot.org/uniprot/Q02110 Q02110]
+
** [http://www.uniprot.org/uniprot/O04934 O04934]
−
** [http://www.uniprot.org/uniprot/P32755 P32755]
+
** [http://www.uniprot.org/uniprot/P17957 P17957]
−
** [http://www.uniprot.org/uniprot/O48604 O48604]
+
** [http://www.uniprot.org/uniprot/P30081 P30081]
−
** [http://www.uniprot.org/uniprot/O23920 O23920]
+
** [http://www.uniprot.org/uniprot/P30080 P30080]
−
** [http://www.uniprot.org/uniprot/P93836 P93836]
+
** [http://www.uniprot.org/uniprot/Q9S9C0 Q9S9C0]
 +
** [http://www.uniprot.org/uniprot/Q9S9B9 Q9S9B9]
 +
** [http://www.uniprot.org/uniprot/P23419 P23419]
 +
** [http://www.uniprot.org/uniprot/P26018 P26018]
 +
** [http://www.uniprot.org/uniprot/P22928 P22928]
 +
** [http://www.uniprot.org/uniprot/P30079 P30079]
 +
** [http://www.uniprot.org/uniprot/Q01287 Q01287]
 +
** [http://www.uniprot.org/uniprot/Q01288 Q01288]
 +
** [http://www.uniprot.org/uniprot/P51078 P51078]
 +
** [http://www.uniprot.org/uniprot/P51080 P51080]
 +
** [http://www.uniprot.org/uniprot/P30078 P30078]
 +
** [http://www.uniprot.org/uniprot/Q01286 Q01286]
 +
** [http://www.uniprot.org/uniprot/P30073 P30073]
 +
** [http://www.uniprot.org/uniprot/P30074 P30074]
 +
** [http://www.uniprot.org/uniprot/P30076 P30076]
 +
** [http://www.uniprot.org/uniprot/P30077 P30077]
 +
** [http://www.uniprot.org/uniprot/P51089 P51089]
 +
** [http://www.uniprot.org/uniprot/P51075 P51075]
 +
** [http://www.uniprot.org/uniprot/P16107 P16107]
 +
** [http://www.uniprot.org/uniprot/P51077 P51077]
 +
** [http://www.uniprot.org/uniprot/P51079 P51079]
 +
** [http://www.uniprot.org/uniprot/P30075 P30075]
 +
** [http://www.uniprot.org/uniprot/P51081 P51081]
 +
** [http://www.uniprot.org/uniprot/P51082 P51082]
 +
** [http://www.uniprot.org/uniprot/P48390 P48390]
 +
** [http://www.uniprot.org/uniprot/P48405 P48405]
 +
** [http://www.uniprot.org/uniprot/P48406 P48406]
 +
** [http://www.uniprot.org/uniprot/P23569 P23569]
 +
** [http://www.uniprot.org/uniprot/P13416 P13416]
 +
** [http://www.uniprot.org/uniprot/P13417 P13417]
 +
** [http://www.uniprot.org/uniprot/P17818 P17818]
 +
** [http://www.uniprot.org/uniprot/P13114 P13114]
 +
** [http://www.uniprot.org/uniprot/P08894 P08894]
 +
** [http://www.uniprot.org/uniprot/P22924 P22924]
 +
** [http://www.uniprot.org/uniprot/P22925 P22925]
 +
** [http://www.uniprot.org/uniprot/P22926 P22926]
 +
** [http://www.uniprot.org/uniprot/P22927 P22927]
 +
** [http://www.uniprot.org/uniprot/P06515 P06515]
 +
** [http://www.uniprot.org/uniprot/P24826 P24826]
 +
** [http://www.uniprot.org/uniprot/P19168 P19168]
 +
** [http://www.uniprot.org/uniprot/P24825 P24825]
 +
** [http://www.uniprot.org/uniprot/P24824 P24824]
 +
** [http://www.uniprot.org/uniprot/Q40005 Q40005]
 +
** [http://www.uniprot.org/uniprot/Q96562 Q96562]
 +
** [http://www.uniprot.org/uniprot/O22047 O22047]
 +
** [http://www.uniprot.org/uniprot/O04971 O04971]
 +
** [http://www.uniprot.org/uniprot/P48389 P48389]
 +
** [http://www.uniprot.org/uniprot/P48398 P48398]
 +
** [http://www.uniprot.org/uniprot/P48399 P48399]
 +
** [http://www.uniprot.org/uniprot/Q96568 Q96568]
 +
** [http://www.uniprot.org/uniprot/P48397 P48397]
 +
** [http://www.uniprot.org/uniprot/O04966 O04966]
 +
** [http://www.uniprot.org/uniprot/O04967 O04967]
 +
** [http://www.uniprot.org/uniprot/O04968 O04968]
 +
** [http://www.uniprot.org/uniprot/O04969 O04969]
 +
** [http://www.uniprot.org/uniprot/O04970 O04970]
 +
** [http://www.uniprot.org/uniprot/Q41292 Q41292]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase}}
+
{{#set: ec number=EC-2.3.1.74}}
−
{{#set: ec number=EC-1.13.11.27}}
+
{{#set: gene associated=Ec-07_006660|Ec-02_004580|Ec-07_003670}}
−
{{#set: gene associated=Ec-23_003630}}
+
{{#set: in pathway=PWY1F-FLAVSYN|PWY-6316|PWY-7397|PWY-5135|PWY-6787}}
−
{{#set: in pathway=PWY-1581|PWY-7432|TYRFUMCAT-PWY|PWY-1422}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction source=orthology-aragem}}
−
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Latest revision as of 20:37, 21 March 2018

Reaction NARINGENIN-CHALCONE-SYNTHASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY1F-FLAVSYN, flavonoid biosynthesis: PWY1F-FLAVSYN
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-6316, aromatic polyketides biosynthesis: PWY-6316
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-7397, naringenin biosynthesis (engineered): PWY-7397
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-5135, xanthohumol biosynthesis: PWY-5135
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-6787, flavonoid biosynthesis (in equisetum): PWY-6787
    • 6 reactions found over 10 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=NARINGENIN-CHALCONE-SYNTHASE-RXN&oldid=28289"