Difference between revisions of "Ec-11 005950"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=OHMETHYLBILANESYN-RXN OHMETHYLBILANESYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** hyd...")
(Created page with "Category:Gene == Gene Ec-11_005950 == * left end position: ** 5952886 * transcription direction: ** NEGATIVE * right end position: ** 5971297 * centisome position: ** 94.6...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=OHMETHYLBILANESYN-RXN OHMETHYLBILANESYN-RXN] ==
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== Gene Ec-11_005950 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 5952886
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* common name:
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* transcription direction:
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** hydroxymethylbilane synthase, putative chloroplast precursor
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** NEGATIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/2.5.1.61 EC-2.5.1.61]
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** 5971297
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* centisome position:
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** 94.64562   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0031_0114
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** Esi0031_0114
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** PP
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[3.1.3.16-RXN]]
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** 4 [[PORPHOBILINOGEN]][c] '''+''' 1 [[WATER]][c] '''=>''' 4 [[AMMONIUM]][c] '''+''' 1 [[HYDROXYMETHYLBILANE]][c]
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* With common name(s):
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** 4 porphobilinogen[c] '''+''' 1 H2O[c] '''=>''' 4 ammonium[c] '''+''' 1 preuroporphyrinogen[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-25_002760]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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** [[pantograph]]-[[aragem]]
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== Pathways  ==
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* [[PWY-5189]], tetrapyrrole biosynthesis II (from glycine): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5189 PWY-5189]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-5188]], tetrapyrrole biosynthesis I (from glutamate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5188 PWY-5188]
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** '''6''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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== Pathways associated ==
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=5952886}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13185 13185]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=5971297}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00084 R00084]
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{{#set: centisome position=94.64562    }}
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* UNIPROT:
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{{#set: common name=Esi_0031_0114|Esi0031_0114|PP}}
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** [http://www.uniprot.org/uniprot/Q57989 Q57989]
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{{#set: reaction associated=3.1.3.16-RXN}}
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** [http://www.uniprot.org/uniprot/O29026 O29026]
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** [http://www.uniprot.org/uniprot/P64336 P64336]
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** [http://www.uniprot.org/uniprot/Q9ZMJ7 Q9ZMJ7]
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** [http://www.uniprot.org/uniprot/Q9PHW9 Q9PHW9]
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** [http://www.uniprot.org/uniprot/Q9JVS4 Q9JVS4]
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** [http://www.uniprot.org/uniprot/P28464 P28464]
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** [http://www.uniprot.org/uniprot/Q9K0P6 Q9K0P6]
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** [http://www.uniprot.org/uniprot/P56140 P56140]
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** [http://www.uniprot.org/uniprot/Q9Y9J0 Q9Y9J0]
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** [http://www.uniprot.org/uniprot/Q9RRY0 Q9RRY0]
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** [http://www.uniprot.org/uniprot/O26960 O26960]
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** [http://www.uniprot.org/uniprot/Q9ZD77 Q9ZD77]
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** [http://www.uniprot.org/uniprot/P06983 P06983]
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** [http://www.uniprot.org/uniprot/P13446 P13446]
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** [http://www.uniprot.org/uniprot/P08397 P08397]
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** [http://www.uniprot.org/uniprot/P22907 P22907]
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** [http://www.uniprot.org/uniprot/P19356 P19356]
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** [http://www.uniprot.org/uniprot/Q43082 Q43082]
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** [http://www.uniprot.org/uniprot/P40129 P40129]
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** [http://www.uniprot.org/uniprot/P30527 P30527]
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** [http://www.uniprot.org/uniprot/P28789 P28789]
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** [http://www.uniprot.org/uniprot/Q60169 Q60169]
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** [http://www.uniprot.org/uniprot/Q43316 Q43316]
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** [http://www.uniprot.org/uniprot/Q49808 Q49808]
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** [http://www.uniprot.org/uniprot/P73660 P73660]
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** [http://www.uniprot.org/uniprot/Q9WX16 Q9WX16]
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** [http://www.uniprot.org/uniprot/Q09899 Q09899]
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** [http://www.uniprot.org/uniprot/Q9ZND1 Q9ZND1]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=hydroxymethylbilane synthase, putative chloroplast precursor}}
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{{#set: ec number=EC-2.5.1.61}}
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{{#set: gene associated=Ec-25_002760}}
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{{#set: in pathway=PWY-5189|PWY-5188}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 19:38, 21 March 2018

Gene Ec-11_005950

  • left end position:
    • 5952886
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 5971297
  • centisome position:
    • 94.64562
  • Synonym(s):
    • Esi_0031_0114
    • Esi0031_0114
    • PP

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-11_005950&oldid=28304"