Difference between revisions of "Ec-02 003100"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14384 RXN-14384] == * direction: ** LEFT-TO-RIGHT * common name: ** Aminotransferase class V do...")
 
(Created page with "Category:Gene == Gene Ec-02_003100 == * left end position: ** 3429694 * transcription direction: ** NEGATIVE * right end position: ** 3439284 * centisome position: ** 52.5...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14384 RXN-14384] ==
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== Gene Ec-02_003100 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 3429694
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* common name:
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* transcription direction:
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** Aminotransferase class V domain
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** NEGATIVE
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** Cysteine desulfurase
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* right end position:
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* ec number:
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** 3439284
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** [http://enzyme.expasy.org/EC/2.8.1.7 EC-2.8.1.7]
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* centisome position:
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** 52.539886   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0209_0031
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** Esi0209_0031
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** MDH
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[MALATE-DEH-RXN]]
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** 1 [[S-CD-Apo-SP-Complex]][c] '''=>''' 1 [[CD-S-SP-Complex]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 an S-sulfanyl-[cysteine desulfurase]-[disordered-form scaffold protein] complex[c] '''=>''' 1 a [cysteine desulfurase]-S-sulfanyl-[disordered-form scaffold protein] complex[c]
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** Source: [[orthology-aragem]]
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** Source: [[orthology-aragem]]
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== Genes associated with this reaction  ==
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** Source: [[orthology-aragem]]
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Genes have been associated with this reaction based on different elements listed below.
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** Source: [[orthology-aragem]]
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* [[Ec-21_005640]]
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== Pathways associated ==
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** ESILICULOSUS_GENOME
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* [[PWY-561]]
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***EC-NUMBER
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* [[PWY-5913]]
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* [[Ec-21_003740]]
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* [[PWY-1622]]
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** ESILICULOSUS_GENOME
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* [[GLUCONEO-PWY]]
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***EC-NUMBER
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* [[P42-PWY]]
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* [[Ec-22_000950]]
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* [[MALATE-ASPARTATE-SHUTTLE-PWY]]
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** ESILICULOSUS_GENOME
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* [[PWY-5392]]
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***EC-NUMBER
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* [[PWY-7383]]
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== Pathways  ==
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* [[PWY66-398]]
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* [[PWY-7250]], [2Fe-2S] iron-sulfur cluster biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7250 PWY-7250]
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* [[P23-PWY]]
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** '''10''' reactions found over '''10''' reactions in the full pathway
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* [[PWY66-399]]
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== Reconstruction information  ==
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* [[P105-PWY]]
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* [[annotation]]:
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* [[GLYOXYLATE-BYPASS]]
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** [[pathwaytools]]:
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* [[FERMENTATION-PWY]]
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*** [[esiliculosus_genome]]
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* [[PWY-6728]]
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* [[PWY-7115]]
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* [[P108-PWY]]
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* [[PWY-5690]]
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* [[PWY-6969]]
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* [[TCA]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=3429694}}
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{{#set: common name=Aminotransferase class V domain}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: common name=Cysteine desulfurase}}
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{{#set: right end position=3439284}}
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{{#set: ec number=EC-2.8.1.7}}
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{{#set: centisome position=52.539886    }}
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{{#set: gene associated=Ec-21_005640|Ec-21_003740|Ec-22_000950}}
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{{#set: common name=Esi_0209_0031|Esi0209_0031|MDH}}
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{{#set: in pathway=PWY-7250}}
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{{#set: reaction associated=MALATE-DEH-RXN}}
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{{#set: reconstruction category=annotation}}
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{{#set: pathway associated=PWY-561|PWY-5913|PWY-1622|GLUCONEO-PWY|P42-PWY|MALATE-ASPARTATE-SHUTTLE-PWY|PWY-5392|PWY-7383|PWY66-398|P23-PWY|PWY66-399|P105-PWY|GLYOXYLATE-BYPASS|FERMENTATION-PWY|PWY-6728|PWY-7115|P108-PWY|PWY-5690|PWY-6969|TCA}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=esiliculosus_genome}}
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Latest revision as of 19:38, 21 March 2018

Gene Ec-02_003100

  • left end position:
    • 3429694
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 3439284
  • centisome position:
    • 52.539886
  • Synonym(s):
    • Esi_0209_0031
    • Esi0209_0031
    • MDH

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-02_003100&oldid=28333"