Difference between revisions of "Ec-02 003100"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14384 RXN-14384] == * direction: ** LEFT-TO-RIGHT * common name: ** Aminotransferase class V do...")
 
(Created page with "Category:Gene == Gene Ec-02_003100 == * left end position: ** 3429694 * transcription direction: ** NEGATIVE * right end position: ** 3439284 * centisome position: ** 52.5...")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14384 RXN-14384] ==
+
== Gene Ec-02_003100 ==
−
* direction:
+
* left end position:
−
** LEFT-TO-RIGHT
+
** 3429694
−
* common name:
+
* transcription direction:
−
** Aminotransferase class V domain
+
** NEGATIVE
−
** Cysteine desulfurase
+
* right end position:
−
* ec number:
+
** 3439284
−
** [http://enzyme.expasy.org/EC/2.8.1.7 EC-2.8.1.7]
+
* centisome position:
 +
** 52.539886   
 
* Synonym(s):
 
* Synonym(s):
 +
** Esi_0209_0031
 +
** Esi0209_0031
 +
** MDH
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[MALATE-DEH-RXN]]
−
** 1 [[S-CD-Apo-SP-Complex]][c] '''=>''' 1 [[CD-S-SP-Complex]][c]
+
** Source: [[annotation-esiliculosus_genome]]
−
* With common name(s):
+
*** Assignment: ec-number
−
** 1 an S-sulfanyl-[cysteine desulfurase]-[disordered-form scaffold protein] complex[c] '''=>''' 1 a [cysteine desulfurase]-S-sulfanyl-[disordered-form scaffold protein] complex[c]
+
** Source: [[orthology-aragem]]
−
 
+
** Source: [[orthology-aragem]]
−
== Genes associated with this reaction  ==
+
** Source: [[orthology-aragem]]
−
Genes have been associated with this reaction based on different elements listed below.
+
** Source: [[orthology-aragem]]
−
* [[Ec-21_005640]]
+
== Pathways associated ==
−
** ESILICULOSUS_GENOME
+
* [[PWY-561]]
−
***EC-NUMBER
+
* [[PWY-5913]]
−
* [[Ec-21_003740]]
+
* [[PWY-1622]]
−
** ESILICULOSUS_GENOME
+
* [[GLUCONEO-PWY]]
−
***EC-NUMBER
+
* [[P42-PWY]]
−
* [[Ec-22_000950]]
+
* [[MALATE-ASPARTATE-SHUTTLE-PWY]]
−
** ESILICULOSUS_GENOME
+
* [[PWY-5392]]
−
***EC-NUMBER
+
* [[PWY-7383]]
−
== Pathways  ==
+
* [[PWY66-398]]
−
* [[PWY-7250]], [2Fe-2S] iron-sulfur cluster biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7250 PWY-7250]
+
* [[P23-PWY]]
−
** '''10''' reactions found over '''10''' reactions in the full pathway
+
* [[PWY66-399]]
−
== Reconstruction information  ==
+
* [[P105-PWY]]
−
* [[annotation]]:
+
* [[GLYOXYLATE-BYPASS]]
−
** [[pathwaytools]]:
+
* [[FERMENTATION-PWY]]
−
*** [[esiliculosus_genome]]
+
* [[PWY-6728]]
 +
* [[PWY-7115]]
 +
* [[P108-PWY]]
 +
* [[PWY-5690]]
 +
* [[PWY-6969]]
 +
* [[TCA]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: left end position=3429694}}
−
{{#set: common name=Aminotransferase class V domain}}
+
{{#set: transcription direction=NEGATIVE}}
−
{{#set: common name=Cysteine desulfurase}}
+
{{#set: right end position=3439284}}
−
{{#set: ec number=EC-2.8.1.7}}
+
{{#set: centisome position=52.539886    }}
−
{{#set: gene associated=Ec-21_005640|Ec-21_003740|Ec-22_000950}}
+
{{#set: common name=Esi_0209_0031|Esi0209_0031|MDH}}
−
{{#set: in pathway=PWY-7250}}
+
{{#set: reaction associated=MALATE-DEH-RXN}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: pathway associated=PWY-561|PWY-5913|PWY-1622|GLUCONEO-PWY|P42-PWY|MALATE-ASPARTATE-SHUTTLE-PWY|PWY-5392|PWY-7383|PWY66-398|P23-PWY|PWY66-399|P105-PWY|GLYOXYLATE-BYPASS|FERMENTATION-PWY|PWY-6728|PWY-7115|P108-PWY|PWY-5690|PWY-6969|TCA}}
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=esiliculosus_genome}}
+

Latest revision as of 20:38, 21 March 2018

Gene Ec-02_003100

  • left end position:
    • 3429694
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 3439284
  • centisome position:
    • 52.539886
  • Synonym(s):
    • Esi_0209_0031
    • Esi0209_0031
    • MDH

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-02_003100&oldid=28333"