Difference between revisions of "Ec-01 008040"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10715 RXN-10715] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
(Created page with "Category:Gene == Gene Ec-01_008040 == * left end position: ** 6908895 * transcription direction: ** POSITIVE * right end position: ** 6912893 * centisome position: ** 66.9...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10715 RXN-10715] ==
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== Gene Ec-01_008040 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 6908895
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/1.2.1.3 EC-1.2.1.3]
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** POSITIVE
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* right end position:
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** 6912893
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* centisome position:
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** 66.954216   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0002_0064
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** Esi0002_0064
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** FBA1
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[F16ALDOLASE-RXN]]
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** 1 [[INDOLE_ACETALDEHYDE]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[NADH]][c] '''+''' 1 [[INDOLE_ACETATE_AUXIN]][c] '''+''' 2 [[PROTON]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: go-term
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** 1 indole acetaldehyde[c] '''+''' 1 H2O[c] '''+''' 1 NAD+[c] '''=>''' 1 NADH[c] '''+''' 1 indole-3-acetate[c] '''+''' 2 H+[c]
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* Reaction: [[RXN-8631]]
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** Source: [[annotation-esiliculosus_genome]]
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== Genes associated with this reaction  ==
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*** Assignment: go-term
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Genes have been associated with this reaction based on different elements listed below.
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== Pathways associated ==
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* [[Ec-11_002450]]
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* [[PWY-1042]]
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** [[pantograph]]-[[aragem]]
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* [[P341-PWY]]
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== Pathways  ==
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* [[PWY66-373]]
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* [[PWY-6307]], L-tryptophan degradation X (mammalian, via tryptamine): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6307 PWY-6307]
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* [[GLUCONEO-PWY]]
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** '''1''' reactions found over '''4''' reactions in the full pathway
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* [[GLYCOLYSIS]]
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== Reconstruction information  ==
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* [[SUCSYN-PWY]]
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* Category: [[orthology]]
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* [[PWY-7385]]
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** Source: [[orthology-aragem]]
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* [[ANAGLYCOLYSIS-PWY]]
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*** Tool: [[pantograph]]
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* [[CALVIN-PWY]]
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* [[PWY-1861]]
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* [[PWY-6142]]
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* [[PWY-5484]]
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* [[P185-PWY]]
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* [[PWY66-399]]
 
== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: left end position=6908895}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02678 R02678]
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{{#set: transcription direction=POSITIVE}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=6912893}}
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{{#set: ec number=EC-1.2.1.3}}
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{{#set: centisome position=66.954216    }}
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{{#set: gene associated=Ec-11_002450}}
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{{#set: common name=Esi_0002_0064|Esi0002_0064|FBA1}}
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{{#set: in pathway=PWY-6307}}
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{{#set: reaction associated=F16ALDOLASE-RXN|RXN-8631}}
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{{#set: reconstruction category=orthology}}
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{{#set: pathway associated=PWY-1042|P341-PWY|PWY66-373|GLUCONEO-PWY|GLYCOLYSIS|SUCSYN-PWY|PWY-7385|ANAGLYCOLYSIS-PWY|CALVIN-PWY|PWY-1861|PWY-6142|PWY-5484|P185-PWY|PWY66-399}}
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{{#set: reconstruction source=orthology-aragem}}
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{{#set: reconstruction tool=pantograph}}
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Latest revision as of 19:38, 21 March 2018

Gene Ec-01_008040

  • left end position:
    • 6908895
  • transcription direction:
    • POSITIVE
  • right end position:
    • 6912893
  • centisome position:
    • 66.954216
  • Synonym(s):
    • Esi_0002_0064
    • Esi0002_0064
    • FBA1

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-01_008040&oldid=28340"