Difference between revisions of "CARBODEHYDRAT-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ISOCIT-CLEAV-RXN ISOCIT-CLEAV-RXN] == * direction: ** REVERSIBLE * common name: ** isocitrate lyase...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CARBODEHYDRAT-RXN CARBODEHYDRAT-RXN] == * direction: ** REVERSIBLE * common name: ** Carbonic anhyd...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ISOCIT-CLEAV-RXN ISOCIT-CLEAV-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CARBODEHYDRAT-RXN CARBODEHYDRAT-RXN] ==
 
* direction:
 
* direction:
 
** REVERSIBLE
 
** REVERSIBLE
 
* common name:
 
* common name:
−
** isocitrate lyase
+
** Carbonic anhydrase
 +
** carbonate dehydratase
 +
** Trimeric LpxA-like
 +
** gamma carbonic anhydrase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/4.1.3.1 EC-4.1.3.1]
+
** [http://enzyme.expasy.org/EC/4.2.1.1 EC-4.2.1.1]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[THREO-DS-ISO-CITRATE]][c] '''<=>''' 1 [[GLYOX]][c] '''+''' 1 [[SUC]][c]
+
** 1 [[H2CO3]][c] '''<=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[WATER]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 D-threo-isocitrate[c] '''<=>''' 1 glyoxylate[c] '''+''' 1 succinate[c]
+
** 1 carbonic acid[c] '''<=>''' 1 CO2[c] '''+''' 1 H2O[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-12_007550]]
+
* Gene: [[Ec-27_005680]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***GO-TERM
+
*** Assignment: GO-TERM
 +
* Gene: [[Ec-22_001150]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-05_001290]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-16_004700]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-07_004610]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-06_004120]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-03_001960]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-10_002770]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[P105-PWY]], TCA cycle IV (2-oxoglutarate decarboxylase): [http://metacyc.org/META/NEW-IMAGE?object=P105-PWY P105-PWY]
 
−
** '''9''' reactions found over '''11''' reactions in the full pathway
 
−
* [[GLYOXYLATE-BYPASS]], glyoxylate cycle: [http://metacyc.org/META/NEW-IMAGE?object=GLYOXYLATE-BYPASS GLYOXYLATE-BYPASS]
 
−
** '''6''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-6969]], TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6969 PWY-6969]
 
−
** '''10''' reactions found over '''12''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
Line 33: Line 51:
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13245 13245]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10748 10748]
−
* PIR:
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A41338 A41338]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=I40713 I40713]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=JA0155 JA0155]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=JC6182 JC6182]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S26857 S26857]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S26858 S26858]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S39953 S39953]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S52819 S52819]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S77654 S77654]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T04115 T04115]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T06353 T06353]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T07631 T07631]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T07632 T07632]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T08046 T08046]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T09774 T09774]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T09779 T09779]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T11209 T11209]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=WZBYI WZBYI]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=WZCKI WZCKI]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=WZCNIU WZCNIU]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=WZCSI WZCSI]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=WZECIC WZECIC]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=WZRPI WZRPI]
+
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00479 R00479]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00132 R00132]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P28467 P28467]
+
** [http://www.uniprot.org/uniprot/P07450 P07450]
−
** [http://www.uniprot.org/uniprot/P42449 P42449]
+
** [http://www.uniprot.org/uniprot/P07452 P07452]
−
** [http://www.uniprot.org/uniprot/P20699 P20699]
+
** [http://www.uniprot.org/uniprot/P13634 P13634]
−
** [http://www.uniprot.org/uniprot/O13439 O13439]
+
** [http://www.uniprot.org/uniprot/P08060 P08060]
−
** [http://www.uniprot.org/uniprot/P28299 P28299]
+
** [http://www.uniprot.org/uniprot/P16016 P16016]
−
** [http://www.uniprot.org/uniprot/Q12031 Q12031]
+
** [http://www.uniprot.org/uniprot/P20507 P20507]
−
** [http://www.uniprot.org/uniprot/P46831 P46831]
+
** [http://www.uniprot.org/uniprot/P16015 P16015]
−
** [http://www.uniprot.org/uniprot/O24588 O24588]
+
** [http://www.uniprot.org/uniprot/P40881 P40881]
−
** [http://www.uniprot.org/uniprot/P49297 P49297]
+
** [http://www.uniprot.org/uniprot/Q7LZP1 Q7LZP1]
−
** [http://www.uniprot.org/uniprot/P45456 P45456]
+
** [http://www.uniprot.org/uniprot/Q8X938 Q8X938]
−
** [http://www.uniprot.org/uniprot/P45457 P45457]
+
** [http://www.uniprot.org/uniprot/P00921 P00921]
−
** [http://www.uniprot.org/uniprot/Q39577 Q39577]
+
** [http://www.uniprot.org/uniprot/P00917 P00917]
−
** [http://www.uniprot.org/uniprot/Q41084 Q41084]
+
** [http://www.uniprot.org/uniprot/P00915 P00915]
−
** [http://www.uniprot.org/uniprot/Q43097 Q43097]
+
** [http://www.uniprot.org/uniprot/P00918 P00918]
−
** [http://www.uniprot.org/uniprot/P28240 P28240]
+
** [http://www.uniprot.org/uniprot/P07451 P07451]
−
** [http://www.uniprot.org/uniprot/P20014 P20014]
+
** [http://www.uniprot.org/uniprot/P22748 P22748]
−
** [http://www.uniprot.org/uniprot/P17069 P17069]
+
** [http://www.uniprot.org/uniprot/P35218 P35218]
−
** [http://www.uniprot.org/uniprot/P15479 P15479]
+
** [http://www.uniprot.org/uniprot/P43166 P43166]
−
** [http://www.uniprot.org/uniprot/P0A9G6 P0A9G6]
+
** [http://www.uniprot.org/uniprot/P00916 P00916]
−
** [http://www.uniprot.org/uniprot/P25248 P25248]
+
** [http://www.uniprot.org/uniprot/P00920 P00920]
 +
** [http://www.uniprot.org/uniprot/P00922 P00922]
 +
** [http://www.uniprot.org/uniprot/O24855 O24855]
 +
** [http://www.uniprot.org/uniprot/Q9PIQ7 Q9PIQ7]
 +
** [http://www.uniprot.org/uniprot/P14141 P14141]
 +
** [http://www.uniprot.org/uniprot/P43165 P43165]
 +
** [http://www.uniprot.org/uniprot/P07630 P07630]
 +
** [http://www.uniprot.org/uniprot/P27139 P27139]
 +
** [http://www.uniprot.org/uniprot/P35219 P35219]
 +
** [http://www.uniprot.org/uniprot/Q7M317 Q7M317]
 +
** [http://www.uniprot.org/uniprot/Q7M316 Q7M316]
 +
** [http://www.uniprot.org/uniprot/P0ABE9 P0ABE9]
 +
** [http://www.uniprot.org/uniprot/P18761 P18761]
 +
** [http://www.uniprot.org/uniprot/P17067 P17067]
 +
** [http://www.uniprot.org/uniprot/P23589 P23589]
 +
** [http://www.uniprot.org/uniprot/P24258 P24258]
 +
** [http://www.uniprot.org/uniprot/P27140 P27140]
 +
** [http://www.uniprot.org/uniprot/P27134 P27134]
 +
** [http://www.uniprot.org/uniprot/P46510 P46510]
 +
** [http://www.uniprot.org/uniprot/P46511 P46511]
 +
** [http://www.uniprot.org/uniprot/P46512 P46512]
 +
** [http://www.uniprot.org/uniprot/P46281 P46281]
 +
** [http://www.uniprot.org/uniprot/P18915 P18915]
 +
** [http://www.uniprot.org/uniprot/Q41728 Q41728]
 +
** [http://www.uniprot.org/uniprot/Q41729 Q41729]
 +
** [http://www.uniprot.org/uniprot/P27141 P27141]
 +
** [http://www.uniprot.org/uniprot/Q40628 Q40628]
 +
** [http://www.uniprot.org/uniprot/Q08056 Q08056]
 +
** [http://www.uniprot.org/uniprot/P40880 P40880]
 +
** [http://www.uniprot.org/uniprot/Q39588 Q39588]
 +
** [http://www.uniprot.org/uniprot/P93108 P93108]
 +
** [http://www.uniprot.org/uniprot/Q92051 Q92051]
 +
** [http://www.uniprot.org/uniprot/O04855 O04855]
 +
** [http://www.uniprot.org/uniprot/Q41088 Q41088]
 +
** [http://www.uniprot.org/uniprot/Q41089 Q41089]
 +
** [http://www.uniprot.org/uniprot/P46513 P46513]
 +
** [http://www.uniprot.org/uniprot/O04846 O04846]
 
{{#set: direction=REVERSIBLE}}
 
{{#set: direction=REVERSIBLE}}
−
{{#set: common name=isocitrate lyase}}
+
{{#set: common name=Carbonic anhydrase}}
−
{{#set: ec number=EC-4.1.3.1}}
+
{{#set: common name=carbonate dehydratase}}
−
{{#set: gene associated=Ec-12_007550}}
+
{{#set: common name=Trimeric LpxA-like}}
−
{{#set: in pathway=P105-PWY|GLYOXYLATE-BYPASS|PWY-6969}}
+
{{#set: common name=gamma carbonic anhydrase}}
 +
{{#set: ec number=EC-4.2.1.1}}
 +
{{#set: gene associated=Ec-27_005680|Ec-22_001150|Ec-05_001290|Ec-16_004700|Ec-07_004610|Ec-06_004120|Ec-03_001960|Ec-10_002770}}
 +
{{#set: in pathway=}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:38, 21 March 2018

Reaction CARBODEHYDRAT-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • Carbonic anhydrase
    • carbonate dehydratase
    • Trimeric LpxA-like
    • gamma carbonic anhydrase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 carbonic acid[c] <=> 1 CO2[c] + 1 H2O[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links






Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=CARBODEHYDRAT-RXN&oldid=28367"