Difference between revisions of "Ec-16 001470"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ISOCIT-CLEAV-RXN ISOCIT-CLEAV-RXN] == * direction: ** REVERSIBLE * common name: ** isocitrate lyase...")
 
(Created page with "Category:Gene == Gene Ec-16_001470 == * left end position: ** 1597491 * transcription direction: ** POSITIVE * right end position: ** 1608234 * centisome position: ** 29.9...")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ISOCIT-CLEAV-RXN ISOCIT-CLEAV-RXN] ==
+
== Gene Ec-16_001470 ==
−
* direction:
+
* left end position:
−
** REVERSIBLE
+
** 1597491
−
* common name:
+
* transcription direction:
−
** isocitrate lyase
+
** POSITIVE
−
* ec number:
+
* right end position:
−
** [http://enzyme.expasy.org/EC/4.1.3.1 EC-4.1.3.1]
+
** 1608234
 +
* centisome position:
 +
** 29.92871   
 
* Synonym(s):
 
* Synonym(s):
 +
** Esi_0194_0013
 +
** Esi0194_0013
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[2.7.7.8-RXN]]
−
** 1 [[THREO-DS-ISO-CITRATE]][c] '''<=>''' 1 [[GLYOX]][c] '''+''' 1 [[SUC]][c]
+
** Source: [[annotation-esiliculosus_genome]]
−
* With common name(s):
+
*** Assignment: go-term
−
** 1 D-threo-isocitrate[c] '''<=>''' 1 glyoxylate[c] '''+''' 1 succinate[c]
+
== Pathways associated ==
−
 
+
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* [[Ec-12_007550]]
+
−
** ESILICULOSUS_GENOME
+
−
***GO-TERM
+
−
== Pathways  ==
+
−
* [[P105-PWY]], TCA cycle IV (2-oxoglutarate decarboxylase): [http://metacyc.org/META/NEW-IMAGE?object=P105-PWY P105-PWY]
+
−
** '''9''' reactions found over '''11''' reactions in the full pathway
+
−
* [[GLYOXYLATE-BYPASS]], glyoxylate cycle: [http://metacyc.org/META/NEW-IMAGE?object=GLYOXYLATE-BYPASS GLYOXYLATE-BYPASS]
+
−
** '''6''' reactions found over '''6''' reactions in the full pathway
+
−
* [[PWY-6969]], TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6969 PWY-6969]
+
−
** '''10''' reactions found over '''12''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[esiliculosus_genome]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: left end position=1597491}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13245 13245]
+
{{#set: transcription direction=POSITIVE}}
−
* PIR:
+
{{#set: right end position=1608234}}
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A41338 A41338]
+
{{#set: centisome position=29.92871    }}
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=I40713 I40713]
+
{{#set: common name=Esi_0194_0013|Esi0194_0013}}
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=JA0155 JA0155]
+
{{#set: reaction associated=2.7.7.8-RXN}}
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=JC6182 JC6182]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S26857 S26857]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S26858 S26858]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S39953 S39953]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S52819 S52819]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S77654 S77654]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T04115 T04115]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T06353 T06353]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T07631 T07631]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T07632 T07632]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T08046 T08046]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T09774 T09774]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T09779 T09779]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T11209 T11209]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=WZBYI WZBYI]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=WZCKI WZCKI]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=WZCNIU WZCNIU]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=WZCSI WZCSI]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=WZECIC WZECIC]
+
−
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=WZRPI WZRPI]
+
−
* LIGAND-RXN:
+
−
** [http://www.genome.jp/dbget-bin/www_bget?R00479 R00479]
+
−
* UNIPROT:
+
−
** [http://www.uniprot.org/uniprot/P28467 P28467]
+
−
** [http://www.uniprot.org/uniprot/P42449 P42449]
+
−
** [http://www.uniprot.org/uniprot/P20699 P20699]
+
−
** [http://www.uniprot.org/uniprot/O13439 O13439]
+
−
** [http://www.uniprot.org/uniprot/P28299 P28299]
+
−
** [http://www.uniprot.org/uniprot/Q12031 Q12031]
+
−
** [http://www.uniprot.org/uniprot/P46831 P46831]
+
−
** [http://www.uniprot.org/uniprot/O24588 O24588]
+
−
** [http://www.uniprot.org/uniprot/P49297 P49297]
+
−
** [http://www.uniprot.org/uniprot/P45456 P45456]
+
−
** [http://www.uniprot.org/uniprot/P45457 P45457]
+
−
** [http://www.uniprot.org/uniprot/Q39577 Q39577]
+
−
** [http://www.uniprot.org/uniprot/Q41084 Q41084]
+
−
** [http://www.uniprot.org/uniprot/Q43097 Q43097]
+
−
** [http://www.uniprot.org/uniprot/P28240 P28240]
+
−
** [http://www.uniprot.org/uniprot/P20014 P20014]
+
−
** [http://www.uniprot.org/uniprot/P17069 P17069]
+
−
** [http://www.uniprot.org/uniprot/P15479 P15479]
+
−
** [http://www.uniprot.org/uniprot/P0A9G6 P0A9G6]
+
−
** [http://www.uniprot.org/uniprot/P25248 P25248]
+
−
{{#set: direction=REVERSIBLE}}
+
−
{{#set: common name=isocitrate lyase}}
+
−
{{#set: ec number=EC-4.1.3.1}}
+
−
{{#set: gene associated=Ec-12_007550}}
+
−
{{#set: in pathway=P105-PWY|GLYOXYLATE-BYPASS|PWY-6969}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=esiliculosus_genome}}
+

Latest revision as of 20:38, 21 March 2018

Gene Ec-16_001470

  • left end position:
    • 1597491
  • transcription direction:
    • POSITIVE
  • right end position:
    • 1608234
  • centisome position:
    • 29.92871
  • Synonym(s):
    • Esi_0194_0013
    • Esi0194_0013

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-16_001470&oldid=28385"