Difference between revisions of "Ec-03 004720"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16135 RXN-16135] == * direction: ** LEFT-TO-RIGHT * common name: ** ClpP/crotonase-like domain...")
(Created page with "Category:Gene == Gene Ec-03_004720 == * left end position: ** 5529917 * transcription direction: ** POSITIVE * right end position: ** 5534363 * centisome position: ** 84.7...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16135 RXN-16135] ==
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== Gene Ec-03_004720 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 5529917
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* common name:
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* transcription direction:
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** ClpP/crotonase-like domain
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** POSITIVE
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** Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ
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* right end position:
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** enoyl-Coenzyme A hydratase/3-hydroxyacyl Coenzyme A dehydrogenase
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** 5534363
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/4.2.1.17 EC-4.2.1.17]
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** 84.70216   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0050_0038
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** Esi0050_0038
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** HIS4
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[PRIBFAICARPISOM-RXN]]
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** 1 [[WATER]][c] '''+''' 1 [[CPD-17386]][c] '''=>''' 1 [[CPD-17387]][c]
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* With common name(s):
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** 1 H2O[c] '''+''' 1 (2E,6Z,9Z,12Z,15Z,18Z,21Z)-tetracosaheptaenoyl-CoA[c] '''=>''' 1 (3S)-hydroxy-(6Z,9Z,12Z,15Z,18Z,21Z)-tetracosahexaenoyl-CoA[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-16_003560]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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* Gene: [[Ec-14_006530]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-06_001380]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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* Gene: [[Ec-16_001250]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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* [[PWY-7606]], docosahexaenoate biosynthesis III (6-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7606 PWY-7606]
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** '''14''' reactions found over '''14''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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** Source: [[orthology-aragem]]
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== Pathways associated ==
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* [[HISTSYN-PWY]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=5529917}}
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{{#set: common name=ClpP/crotonase-like domain}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ}}
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{{#set: right end position=5534363}}
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{{#set: common name=enoyl-Coenzyme A hydratase/3-hydroxyacyl Coenzyme A dehydrogenase}}
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{{#set: centisome position=84.70216    }}
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{{#set: ec number=EC-4.2.1.17}}
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{{#set: common name=Esi_0050_0038|Esi0050_0038|HIS4}}
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{{#set: gene associated=Ec-16_003560|Ec-14_006530|Ec-06_001380|Ec-16_001250}}
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{{#set: reaction associated=PRIBFAICARPISOM-RXN}}
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{{#set: in pathway=PWY-7606}}
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{{#set: pathway associated=HISTSYN-PWY}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 20:38, 21 March 2018

Gene Ec-03_004720

  • left end position:
    • 5529917
  • transcription direction:
    • POSITIVE
  • right end position:
    • 5534363
  • centisome position:
    • 84.70216
  • Synonym(s):
    • Esi_0050_0038
    • Esi0050_0038
    • HIS4

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-03_004720&oldid=28407"