Difference between revisions of "RXN-11375"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CARBODEHYDRAT-RXN CARBODEHYDRAT-RXN] == * direction: ** REVERSIBLE * common name: ** Carbonic anhyd...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11375 RXN-11375] == * direction: ** LEFT-TO-RIGHT * common name: ** Ceramidase * ec number: **...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CARBODEHYDRAT-RXN CARBODEHYDRAT-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11375 RXN-11375] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Carbonic anhydrase
+
** Ceramidase
−
** carbonate dehydratase
+
−
** Trimeric LpxA-like
+
−
** gamma carbonic anhydrase
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/4.2.1.1 EC-4.2.1.1]
+
** [http://enzyme.expasy.org/EC/3.5.1.23 EC-3.5.1.23]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[H2CO3]][c] '''<=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[WATER]][c]
+
** 1 [[WATER]][c] '''+''' 1 [[Ceramides]][c] '''=>''' 1 [[Sphingoids]][c] '''+''' 1 [[Fatty-Acids]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 carbonic acid[c] '''<=>''' 1 CO2[c] '''+''' 1 H2O[c]
+
** 1 H2O[c] '''+''' 1 a ceramide[c] '''=>''' 1 a sphingoid base[c] '''+''' 1 a fatty acid[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Ec-27_005680]]
+
* Gene: [[Ec-26_006010]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
−
*** Assignment: GO-TERM
+
*** Assignment: AUTOMATED-NAME-MATCH
−
* Gene: [[Ec-22_001150]]
+
−
** Source: [[annotation-esiliculosus_genome]]
+
−
*** Assignment: EC-NUMBER
+
−
* Gene: [[Ec-05_001290]]
+
−
** Source: [[annotation-esiliculosus_genome]]
+
−
*** Assignment: GO-TERM
+
−
* Gene: [[Ec-16_004700]]
+
−
** Source: [[annotation-esiliculosus_genome]]
+
−
*** Assignment: GO-TERM
+
−
* Gene: [[Ec-07_004610]]
+
−
** Source: [[annotation-esiliculosus_genome]]
+
−
*** Assignment: EC-NUMBER
+
−
* Gene: [[Ec-06_004120]]
+
−
** Source: [[annotation-esiliculosus_genome]]
+
−
*** Assignment: EC-NUMBER
+
−
* Gene: [[Ec-03_001960]]
+
−
** Source: [[annotation-esiliculosus_genome]]
+
−
*** Assignment: EC-NUMBER
+
−
* Gene: [[Ec-10_002770]]
+
−
** Source: [[annotation-esiliculosus_genome]]
+
−
*** Assignment: EC-NUMBER
+
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-6483]], ceramide degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6483 PWY-6483]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
Line 50: Line 28:
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: direction=LEFT-TO-RIGHT}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10748 10748]
+
{{#set: common name=Ceramidase}}
−
* LIGAND-RXN:
+
{{#set: ec number=EC-3.5.1.23}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R00132 R00132]
+
{{#set: gene associated=Ec-26_006010}}
−
* UNIPROT:
+
{{#set: in pathway=PWY-6483}}
−
** [http://www.uniprot.org/uniprot/P07450 P07450]
+
−
** [http://www.uniprot.org/uniprot/P07452 P07452]
+
−
** [http://www.uniprot.org/uniprot/P13634 P13634]
+
−
** [http://www.uniprot.org/uniprot/P08060 P08060]
+
−
** [http://www.uniprot.org/uniprot/P16016 P16016]
+
−
** [http://www.uniprot.org/uniprot/P20507 P20507]
+
−
** [http://www.uniprot.org/uniprot/P16015 P16015]
+
−
** [http://www.uniprot.org/uniprot/P40881 P40881]
+
−
** [http://www.uniprot.org/uniprot/Q7LZP1 Q7LZP1]
+
−
** [http://www.uniprot.org/uniprot/Q8X938 Q8X938]
+
−
** [http://www.uniprot.org/uniprot/P00921 P00921]
+
−
** [http://www.uniprot.org/uniprot/P00917 P00917]
+
−
** [http://www.uniprot.org/uniprot/P00915 P00915]
+
−
** [http://www.uniprot.org/uniprot/P00918 P00918]
+
−
** [http://www.uniprot.org/uniprot/P07451 P07451]
+
−
** [http://www.uniprot.org/uniprot/P22748 P22748]
+
−
** [http://www.uniprot.org/uniprot/P35218 P35218]
+
−
** [http://www.uniprot.org/uniprot/P43166 P43166]
+
−
** [http://www.uniprot.org/uniprot/P00916 P00916]
+
−
** [http://www.uniprot.org/uniprot/P00920 P00920]
+
−
** [http://www.uniprot.org/uniprot/P00922 P00922]
+
−
** [http://www.uniprot.org/uniprot/O24855 O24855]
+
−
** [http://www.uniprot.org/uniprot/Q9PIQ7 Q9PIQ7]
+
−
** [http://www.uniprot.org/uniprot/P14141 P14141]
+
−
** [http://www.uniprot.org/uniprot/P43165 P43165]
+
−
** [http://www.uniprot.org/uniprot/P07630 P07630]
+
−
** [http://www.uniprot.org/uniprot/P27139 P27139]
+
−
** [http://www.uniprot.org/uniprot/P35219 P35219]
+
−
** [http://www.uniprot.org/uniprot/Q7M317 Q7M317]
+
−
** [http://www.uniprot.org/uniprot/Q7M316 Q7M316]
+
−
** [http://www.uniprot.org/uniprot/P0ABE9 P0ABE9]
+
−
** [http://www.uniprot.org/uniprot/P18761 P18761]
+
−
** [http://www.uniprot.org/uniprot/P17067 P17067]
+
−
** [http://www.uniprot.org/uniprot/P23589 P23589]
+
−
** [http://www.uniprot.org/uniprot/P24258 P24258]
+
−
** [http://www.uniprot.org/uniprot/P27140 P27140]
+
−
** [http://www.uniprot.org/uniprot/P27134 P27134]
+
−
** [http://www.uniprot.org/uniprot/P46510 P46510]
+
−
** [http://www.uniprot.org/uniprot/P46511 P46511]
+
−
** [http://www.uniprot.org/uniprot/P46512 P46512]
+
−
** [http://www.uniprot.org/uniprot/P46281 P46281]
+
−
** [http://www.uniprot.org/uniprot/P18915 P18915]
+
−
** [http://www.uniprot.org/uniprot/Q41728 Q41728]
+
−
** [http://www.uniprot.org/uniprot/Q41729 Q41729]
+
−
** [http://www.uniprot.org/uniprot/P27141 P27141]
+
−
** [http://www.uniprot.org/uniprot/Q40628 Q40628]
+
−
** [http://www.uniprot.org/uniprot/Q08056 Q08056]
+
−
** [http://www.uniprot.org/uniprot/P40880 P40880]
+
−
** [http://www.uniprot.org/uniprot/Q39588 Q39588]
+
−
** [http://www.uniprot.org/uniprot/P93108 P93108]
+
−
** [http://www.uniprot.org/uniprot/Q92051 Q92051]
+
−
** [http://www.uniprot.org/uniprot/O04855 O04855]
+
−
** [http://www.uniprot.org/uniprot/Q41088 Q41088]
+
−
** [http://www.uniprot.org/uniprot/Q41089 Q41089]
+
−
** [http://www.uniprot.org/uniprot/P46513 P46513]
+
−
** [http://www.uniprot.org/uniprot/O04846 O04846]
+
−
{{#set: direction=REVERSIBLE}}
+
−
{{#set: common name=Carbonic anhydrase}}
+
−
{{#set: common name=carbonate dehydratase}}
+
−
{{#set: common name=Trimeric LpxA-like}}
+
−
{{#set: common name=gamma carbonic anhydrase}}
+
−
{{#set: ec number=EC-4.2.1.1}}
+
−
{{#set: gene associated=Ec-27_005680|Ec-22_001150|Ec-05_001290|Ec-16_004700|Ec-07_004610|Ec-06_004120|Ec-03_001960|Ec-10_002770}}
+
−
{{#set: in pathway=}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:39, 21 March 2018

Reaction RXN-11375

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Ceramidase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 a ceramide[c] => 1 a sphingoid base[c] + 1 a fatty acid[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6483, ceramide degradation: PWY-6483
    • 1 reactions found over 3 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-11375&oldid=28438"