Difference between revisions of "RXN-11375"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CHOLINE-KINASE-RXN CHOLINE-KINASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** choline/e...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11375 RXN-11375] == * direction: ** LEFT-TO-RIGHT * common name: ** Ceramidase * ec number: **...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CHOLINE-KINASE-RXN CHOLINE-KINASE-RXN] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11375 RXN-11375] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** choline/ethanolamine kinase
+
** Ceramidase
 
* ec number:
 
* ec number:
** [http://enzyme.expasy.org/EC/2.7.1.32 EC-2.7.1.32]
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** [http://enzyme.expasy.org/EC/3.5.1.23 EC-3.5.1.23]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1 [[CHOLINE]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[PHOSPHORYL-CHOLINE]][c]
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** 1 [[WATER]][c] '''+''' 1 [[Ceramides]][c] '''=>''' 1 [[Sphingoids]][c] '''+''' 1 [[Fatty-Acids]][c]
 
* With common name(s):
 
* With common name(s):
** 1 choline[c] '''+''' 1 ATP[c] '''=>''' 1 H+[c] '''+''' 1 ADP[c] '''+''' 1 phosphocholine[c]
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** 1 H2O[c] '''+''' 1 a ceramide[c] '''=>''' 1 a sphingoid base[c] '''+''' 1 a fatty acid[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[Ec-16_004110]]
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* Gene: [[Ec-26_006010]]
** ESILICULOSUS_GENOME
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** Source: [[annotation-esiliculosus_genome]]
***AUTOMATED-NAME-MATCH
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*** Assignment: AUTOMATED-NAME-MATCH
 
== Pathways  ==
 
== Pathways  ==
* [[PWY-7782]], plasmalogen biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7782 PWY-7782]
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* [[PWY-6483]], ceramide degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6483 PWY-6483]
** '''6''' reactions found over '''16''' reactions in the full pathway
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** '''1''' reactions found over '''3''' reactions in the full pathway
* [[PWY3O-450]], phosphatidylcholine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY3O-450 PWY3O-450]
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** '''3''' reactions found over '''3''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[annotation]]:
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* Category: [[annotation]]
** [[pathwaytools]]:
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** Source: [[annotation-esiliculosus_genome]]
*** [[esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12837 12837]
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R01021 R01021]
 
* UNIPROT:
 
** [http://www.uniprot.org/uniprot/P20485 P20485]
 
** [http://www.uniprot.org/uniprot/Q01134 Q01134]
 
** [http://www.uniprot.org/uniprot/Q42809 Q42809]
 
** [http://www.uniprot.org/uniprot/Q42810 Q42810]
 
** [http://www.uniprot.org/uniprot/Q42811 Q42811]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=choline/ethanolamine kinase}}
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{{#set: common name=Ceramidase}}
{{#set: ec number=EC-2.7.1.32}}
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{{#set: ec number=EC-3.5.1.23}}
{{#set: gene associated=Ec-16_004110}}
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{{#set: gene associated=Ec-26_006010}}
{{#set: in pathway=PWY-7782|PWY3O-450}}
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{{#set: in pathway=PWY-6483}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
{{#set: reconstruction source=esiliculosus_genome}}
 

Latest revision as of 19:39, 21 March 2018

Reaction RXN-11375

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Ceramidase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 a ceramide[c] => 1 a sphingoid base[c] + 1 a fatty acid[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6483, ceramide degradation: PWY-6483
    • 1 reactions found over 3 reactions in the full pathway

Reconstruction information

External links