Difference between revisions of "RXN-12460"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=6.3.4.10-RXN 6.3.4.10-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Biotin/lipoate A/B pr...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12460 RXN-12460] == * direction: ** LEFT-TO-RIGHT * common name: ** L-asparaginyl-tRNAasn hydro...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=6.3.4.10-RXN 6.3.4.10-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12460 RXN-12460] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Biotin/lipoate A/B protein ligase
+
** L-asparaginyl-tRNAasn hydrolase
−
** Biotin/lipoate A/B protein ligase family
+
** aminoacyl-tRNA hydrolase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/6.3.4.10 EC-6.3.4.10]
+
** [http://enzyme.expasy.org/EC/3.1.1.29 EC-3.1.1.29]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[Apo-Propionyl-CoA-CO2-ligases]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[BIOTIN]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[Propionyl-CoA-CO2-ligases]][c] '''+''' 1 [[PPI]][c]
+
** 1 [[WATER]][c] '''+''' 1 [[Charged-ASN-tRNAs]][c] '''=>''' 1 [[ASN-tRNAs]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[ASN]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 apo-[propionyl-CoA:carbon-dioxide ligase (ADP-forming)][c] '''+''' 1 ATP[c] '''+''' 1 biotin[c] '''=>''' 1 AMP[c] '''+''' 1 [propionyl-CoA:carbon-dioxide ligase (ADP-forming)][c] '''+''' 1 diphosphate[c]
+
** 1 H2O[c] '''+''' 1 an L-asparaginyl-[tRNAasn][c] '''=>''' 1 tRNAasn[c] '''+''' 2 H+[c] '''+''' 1 L-asparagine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-00_003530]]
+
* Gene: [[Ec-07_007720]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***AUTOMATED-NAME-MATCH
+
*** Assignment: GO-TERM
−
* [[Ec-11_004970]]
+
* Gene: [[Ec-26_001700]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***AUTOMATED-NAME-MATCH
+
*** Assignment: GO-TERM
−
* [[Ec-05_005190]]
+
* Gene: [[Ec-07_007410]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***AUTOMATED-NAME-MATCH
+
*** Assignment: GO-TERM
−
* [[Ec-01_008620]]
+
* Gene: [[Ec-07_007430]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***AUTOMATED-NAME-MATCH
+
*** Assignment: GO-TERM
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY490-4]], L-asparagine biosynthesis III (tRNA-dependent): [http://metacyc.org/META/NEW-IMAGE?object=PWY490-4 PWY490-4]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
Line 36: Line 38:
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R04582 R04582]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Biotin/lipoate A/B protein ligase}}
+
{{#set: common name=L-asparaginyl-tRNAasn hydrolase}}
−
{{#set: common name=Biotin/lipoate A/B protein ligase family}}
+
{{#set: common name=aminoacyl-tRNA hydrolase}}
−
{{#set: ec number=EC-6.3.4.10}}
+
{{#set: ec number=EC-3.1.1.29}}
−
{{#set: gene associated=Ec-00_003530|Ec-11_004970|Ec-05_005190|Ec-01_008620}}
+
{{#set: gene associated=Ec-07_007720|Ec-26_001700|Ec-07_007410|Ec-07_007430}}
−
{{#set: in pathway=}}
+
{{#set: in pathway=PWY490-4}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:39, 21 March 2018

Reaction RXN-12460

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • L-asparaginyl-tRNAasn hydrolase
    • aminoacyl-tRNA hydrolase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 an L-asparaginyl-[tRNAasn][c] => 1 tRNAasn[c] + 2 H+[c] + 1 L-asparagine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY490-4, L-asparagine biosynthesis III (tRNA-dependent): PWY490-4
    • 2 reactions found over 3 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-12460&oldid=28487"