Difference between revisions of "6.3.5.6-RXN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-7222 CPD-7222] == * smiles: ** CCCCCCCCCC=CC(SCCNC(CCNC(C(C(COP(OP(OCC3(OC(N2(C1(=C(C(=NC=N...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=6.3.5.6-RXN 6.3.5.6-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Asparaginyl-tRNA Synthe...")
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-7222 CPD-7222] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=6.3.5.6-RXN 6.3.5.6-RXN] ==
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* smiles:
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* direction:
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** CCCCCCCCCC=CC(SCCNC(CCNC(C(C(COP(OP(OCC3(OC(N2(C1(=C(C(=NC=N1)N)N=C2)))C(C3OP([O-])([O-])=O)O))([O-])=O)([O-])=O)(C)C)O)=O)=O)=O
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=IRFYVBULXZMEDE-XCFIPPSPSA-J
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* common name:
 
* common name:
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** trans-dodec-2-enoyl-CoA
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** Asparaginyl-tRNA Synthetase
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* molecular weight:
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** Glutathione S-transferase, C-terminal
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** 943.792   
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* ec number:
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** [http://enzyme.expasy.org/EC/6.3.5.6 EC-6.3.5.6]
 
* Synonym(s):
 
* Synonym(s):
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** (2E)-dodecenoyl-CoA
 
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** 2-trans-dodecenoyl-CoA
 
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** (2E)-dodec-2-enoyl-CoA
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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== Reaction(s) known to produce the compound ==
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* With identifiers:
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== Reaction(s) of unknown directionality ==
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** 1 [[GLN]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[L-aspartyl-tRNAAsn]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Charged-ASN-tRNAs]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[GLT]][c] '''+''' 1 [[PROTON]][c]
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* [[RXN-7931]]
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* With common name(s):
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** 1 L-glutamine[c] '''+''' 1 ATP[c] '''+''' 1 an L-aspartyl-[tRNAAsn][c] '''+''' 1 H2O[c] '''=>''' 1 an L-asparaginyl-[tRNAasn][c] '''+''' 1 phosphate[c] '''+''' 1 ADP[c] '''+''' 1 L-glutamate[c] '''+''' 1 H+[c]
 +
 
 +
== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-16_001810]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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* Gene: [[Ec-17_000510]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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* [[PWY490-4]], L-asparagine biosynthesis III (tRNA-dependent): [http://metacyc.org/META/NEW-IMAGE?object=PWY490-4 PWY490-4]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* BIGG : 41433
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* RHEA:
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* PUBCHEM:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14513 14513]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=25245396 25245396]
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* LIGAND-RXN:
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* HMDB : HMDB03712
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** [http://www.genome.jp/dbget-bin/www_bget?R04212 R04212]
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* LIGAND-CPD:
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{{#set: direction=LEFT-TO-RIGHT}}
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** [http://www.genome.jp/dbget-bin/www_bget?C03221 C03221]
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{{#set: common name=Asparaginyl-tRNA Synthetase}}
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* CHEBI:
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{{#set: common name=Glutathione S-transferase, C-terminal}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=57330 57330]
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{{#set: ec number=EC-6.3.5.6}}
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* METABOLIGHTS : MTBLC57330
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{{#set: gene associated=Ec-16_001810|Ec-17_000510}}
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{{#set: smiles=CCCCCCCCCC=CC(SCCNC(CCNC(C(C(COP(OP(OCC3(OC(N2(C1(=C(C(=NC=N1)N)N=C2)))C(C3OP([O-])([O-])=O)O))([O-])=O)([O-])=O)(C)C)O)=O)=O)=O}}
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{{#set: in pathway=PWY490-4}}
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{{#set: inchi key=InChIKey=IRFYVBULXZMEDE-XCFIPPSPSA-J}}
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{{#set: reconstruction category=annotation}}
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{{#set: common name=trans-dodec-2-enoyl-CoA}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: molecular weight=943.792    }}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: common name=(2E)-dodecenoyl-CoA|2-trans-dodecenoyl-CoA|(2E)-dodec-2-enoyl-CoA}}
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{{#set: consumed or produced by=RXN-7931}}
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Latest revision as of 19:39, 21 March 2018

Reaction 6.3.5.6-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Asparaginyl-tRNA Synthetase
    • Glutathione S-transferase, C-terminal
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 L-glutamine[c] + 1 ATP[c] + 1 an L-aspartyl-[tRNAAsn][c] + 1 H2O[c] => 1 an L-asparaginyl-[tRNAasn][c] + 1 phosphate[c] + 1 ADP[c] + 1 L-glutamate[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY490-4, L-asparagine biosynthesis III (tRNA-dependent): PWY490-4
    • 2 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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