Difference between revisions of "RXN-MG-PROTOPORPHYRIN-METHYLESTER-SYN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=H2NEOPTERINP3PYROPHOSPHOHYDRO-RXN H2NEOPTERINP3PYROPHOSPHOHYDRO-RXN] == * direction: ** LEFT-TO-RIG...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-MG-PROTOPORPHYRIN-METHYLESTER-SYN RXN-MG-PROTOPORPHYRIN-METHYLESTER-SYN] == * direction: ** LEF...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=H2NEOPTERINP3PYROPHOSPHOHYDRO-RXN H2NEOPTERINP3PYROPHOSPHOHYDRO-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-MG-PROTOPORPHYRIN-METHYLESTER-SYN RXN-MG-PROTOPORPHYRIN-METHYLESTER-SYN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* common name:
 +
** magnesium protoporphyrin IX methyltransferase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.6.1.67 EC-3.6.1.67]
+
** [http://enzyme.expasy.org/EC/2.1.1.11 EC-2.1.1.11]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[DIHYDRONEOPTERIN-P3]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[DIHYDRONEOPTERIN-P]][c] '''+''' 1 [[PPI]][c]
+
** 1 [[MG-PROTOPORPHYRIN]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[MG-PROTOPORPHYRIN-MONOMETHYL-ESTER]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 7,8-dihydroneopterin 3'-triphosphate[c] '''+''' 1 H2O[c] '''=>''' 1 H+[c] '''+''' 1 7,8-dihydroneopterin 3'-phosphate[c] '''+''' 1 diphosphate[c]
+
** 1 Mg-protoporphyrin[c] '''+''' 1 S-adenosyl-L-methionine[c] '''=>''' 1 magnesium-protoporphyrin IX 13-monomethyl ester[c] '''+''' 1 S-adenosyl-L-homocysteine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-06_010060]]
+
* Gene: [[Ec-01_007810]]
−
** [[pantograph]]-[[aragem]]
+
** Source: [[annotation-esiliculosus_genome]]
−
* [[Ec-15_001630]]
+
*** Assignment: GO-TERM
−
** [[pantograph]]-[[aragem]]
+
−
* [[Ec-15_003300]]
+
−
** [[pantograph]]-[[aragem]]
+
−
* [[Ec-04_000920]]
+
−
** [[pantograph]]-[[aragem]]
+
−
* [[Ec-18_000740]]
+
−
** [[pantograph]]-[[aragem]]
+
−
* [[Ec-24_003120]]
+
−
** [[pantograph]]-[[aragem]]
+
−
* [[Ec-05_006830]]
+
−
** [[pantograph]]-[[aragem]]
+
−
* [[Ec-00_002040]]
+
−
** [[pantograph]]-[[aragem]]
+
−
* [[Ec-06_009970]]
+
−
** [[pantograph]]-[[aragem]]
+
−
* [[Ec-01_000090]]
+
−
** [[pantograph]]-[[aragem]]
+
−
* [[Ec-12_006470]]
+
−
** [[pantograph]]-[[aragem]]
+
−
* [[Ec-06_007890]]
+
−
** [[pantograph]]-[[aragem]]
+
−
* [[Ec-15_000660]]
+
−
** [[pantograph]]-[[aragem]]
+
−
* [[Ec-10_002170]]
+
−
** [[pantograph]]-[[aragem]]
+
−
* [[Ec-09_003740]]
+
−
** [[pantograph]]-[[aragem]]
+
−
* [[Ec-22_000120]]
+
−
** [[pantograph]]-[[aragem]]
+
−
* [[Ec-01_009100]]
+
−
** [[pantograph]]-[[aragem]]
+
−
* [[Ec-10_002470]]
+
−
** [[pantograph]]-[[aragem]]
+
−
* [[Ec-19_001540]]
+
−
** [[pantograph]]-[[aragem]]
+
−
* [[Ec-19_001450]]
+
−
** [[pantograph]]-[[aragem]]
+
−
* [[Ec-19_001310]]
+
−
** [[pantograph]]-[[aragem]]
+
−
* [[Ec-14_006970]]
+
−
** [[pantograph]]-[[aragem]]
+
−
* [[Ec-15_000350]]
+
−
** [[pantograph]]-[[aragem]]
+
−
* [[Ec-09_003200]]
+
−
** [[pantograph]]-[[aragem]]
+
−
* [[Ec-14_006830]]
+
−
** [[pantograph]]-[[aragem]]
+
−
* [[Ec-19_003700]]
+
−
** [[pantograph]]-[[aragem]]
+
−
* [[Ec-12_001230]]
+
−
** [[pantograph]]-[[aragem]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6147]], 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6147 PWY-6147]
+
* [[PWY-5531]], 3,8-divinyl-chlorophyllide a biosynthesis II (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5531 PWY-5531]
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''4''' reactions found over '''9''' reactions in the full pathway
 +
* [[CHLOROPHYLL-SYN]], 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent): [http://metacyc.org/META/NEW-IMAGE?object=CHLOROPHYLL-SYN CHLOROPHYLL-SYN]
 +
** '''6''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-7159]], 3,8-divinyl-chlorophyllide a biosynthesis III (aerobic, light independent): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7159 PWY-7159]
 +
** '''5''' reactions found over '''9''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[orthology]]
+
* Category: [[annotation]]
−
** Source: [[orthology-aragem]]
+
** Source: [[annotation-esiliculosus_genome]]
−
*** Tool: [[pantograph]]
+
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25302 25302]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17809 17809]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R04638 R04638]
+
** [http://www.genome.jp/dbget-bin/www_bget?R04237 R04237]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P26162 P26162]
 +
** [http://www.uniprot.org/uniprot/Q9RFD7 Q9RFD7]
 +
** [http://www.uniprot.org/uniprot/Q9RFD5 Q9RFD5]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-3.6.1.67}}
+
{{#set: common name=magnesium protoporphyrin IX methyltransferase}}
−
{{#set: gene associated=Ec-06_010060|Ec-15_001630|Ec-15_003300|Ec-04_000920|Ec-18_000740|Ec-24_003120|Ec-05_006830|Ec-00_002040|Ec-06_009970|Ec-01_000090|Ec-12_006470|Ec-06_007890|Ec-15_000660|Ec-10_002170|Ec-09_003740|Ec-22_000120|Ec-01_009100|Ec-10_002470|Ec-19_001540|Ec-19_001450|Ec-19_001310|Ec-14_006970|Ec-15_000350|Ec-09_003200|Ec-14_006830|Ec-19_003700|Ec-12_001230}}
+
{{#set: ec number=EC-2.1.1.11}}
−
{{#set: in pathway=PWY-6147}}
+
{{#set: gene associated=Ec-01_007810}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: in pathway=PWY-5531|CHLOROPHYLL-SYN|PWY-7159}}
−
{{#set: reconstruction source=orthology-aragem}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:40, 21 March 2018

Reaction RXN-MG-PROTOPORPHYRIN-METHYLESTER-SYN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • magnesium protoporphyrin IX methyltransferase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5531, 3,8-divinyl-chlorophyllide a biosynthesis II (anaerobic): PWY-5531
    • 4 reactions found over 9 reactions in the full pathway
  • CHLOROPHYLL-SYN, 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent): CHLOROPHYLL-SYN
    • 6 reactions found over 9 reactions in the full pathway
  • PWY-7159, 3,8-divinyl-chlorophyllide a biosynthesis III (aerobic, light independent): PWY-7159
    • 5 reactions found over 9 reactions in the full pathway

Reconstruction information

External links





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