Difference between revisions of "LUMAZINESYN-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-13040 CPD-13040] == * smiles: ** CCCC(OCC(OC(CCC)=O)CO)=O * inchi key: ** InChIKey=AWHAUPZH...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=LUMAZINESYN-RXN LUMAZINESYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** 6,7-dimethyl-8-...")
 
Line 1: Line 1:
−
[[Category:Metabolite]]
+
[[Category:Reaction]]
−
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-13040 CPD-13040] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=LUMAZINESYN-RXN LUMAZINESYN-RXN] ==
−
* smiles:
+
* direction:
−
** CCCC(OCC(OC(CCC)=O)CO)=O
+
** LEFT-TO-RIGHT
−
* inchi key:
+
−
** InChIKey=AWHAUPZHZYUHOM-VIFPVBQESA-N
+
 
* common name:
 
* common name:
−
** 1,2-dibutyrin
+
** 6,7-dimethyl-8-ribityllumazine synthase
−
* molecular weight:
+
* ec number:
−
** 232.276   
+
** [http://enzyme.expasy.org/EC/2.5.1.78 EC-2.5.1.78]
 
* Synonym(s):
 
* Synonym(s):
−
** glycerol 1,2-dibutanoate
 
−
** β-dibutyrin
 
−
** butanoic acid, 1-(hydroxymethyl)-1,2-ethanediyl ester
 
−
** dibutyrylglycerol
 
  
−
== Reaction(s) known to consume the compound ==
+
== Reaction Formula ==
−
== Reaction(s) known to produce the compound ==
+
* With identifiers:
−
* [[RXN-12086]]
+
** 1 [[DIHYDROXY-BUTANONE-P]][c] '''+''' 1 [[AMINO-RIBOSYLAMINO-1H-3H-PYR-DIONE]][c] '''=>''' 1 [[DIMETHYL-D-RIBITYL-LUMAZINE]][c] '''+''' 2 [[WATER]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c]
−
== Reaction(s) of unknown directionality ==
+
* With common name(s):
 +
** 1 1-deoxy-L-glycero-tetrulose 4-phosphate[c] '''+''' 1 5-amino-6-(D-ribitylamino)uracil[c] '''=>''' 1 6,7-dimethyl-8-(1-D-ribityl)lumazine[c] '''+''' 2 H2O[c] '''+''' 1 H+[c] '''+''' 1 phosphate[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Ec-27_002140]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
== Pathways  ==
 +
* [[PWY-6167]], flavin biosynthesis II (archaea): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6167 PWY-6167]
 +
** '''4''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-6168]], flavin biosynthesis III (fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6168 PWY-6168]
 +
** '''6''' reactions found over '''9''' reactions in the full pathway
 +
* [[RIBOSYN2-PWY]], flavin biosynthesis I (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=RIBOSYN2-PWY RIBOSYN2-PWY]
 +
** '''8''' reactions found over '''9''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[annotation]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* CAS : 24814-35-5
+
* RHEA:
−
* PUBCHEM:
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=26152 26152]
−
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=5327007 5327007]
+
* LIGAND-RXN:
−
* CHEMSPIDER:
+
** [http://www.genome.jp/dbget-bin/www_bget?R04457 R04457]
−
** [http://www.chemspider.com/Chemical-Structure.8352519.html 8352519]
+
{{#set: direction=LEFT-TO-RIGHT}}
−
* CHEBI:
+
{{#set: common name=6,7-dimethyl-8-ribityllumazine synthase}}
−
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=76537 76537]
+
{{#set: ec number=EC-2.5.1.78}}
−
{{#set: smiles=CCCC(OCC(OC(CCC)=O)CO)=O}}
+
{{#set: gene associated=Ec-27_002140}}
−
{{#set: inchi key=InChIKey=AWHAUPZHZYUHOM-VIFPVBQESA-N}}
+
{{#set: in pathway=PWY-6167|PWY-6168|RIBOSYN2-PWY}}
−
{{#set: common name=1,2-dibutyrin}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: molecular weight=232.276    }}
+
{{#set: reconstruction source=annotation-esiliculosus_genome}}
−
{{#set: common name=glycerol 1,2-dibutanoate|β-dibutyrin|butanoic acid, 1-(hydroxymethyl)-1,2-ethanediyl ester|dibutyrylglycerol}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: produced by=RXN-12086}}
+

Latest revision as of 20:40, 21 March 2018

Reaction LUMAZINESYN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 6,7-dimethyl-8-ribityllumazine synthase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6167, flavin biosynthesis II (archaea): PWY-6167
    • 4 reactions found over 10 reactions in the full pathway
  • PWY-6168, flavin biosynthesis III (fungi): PWY-6168
    • 6 reactions found over 9 reactions in the full pathway
  • RIBOSYN2-PWY, flavin biosynthesis I (bacteria and plants): RIBOSYN2-PWY
    • 8 reactions found over 9 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=LUMAZINESYN-RXN&oldid=28580"