Difference between revisions of "Ec-04 002150"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=LUMAZINESYN-RXN LUMAZINESYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** 6,7-dimethyl-8-...")
(Created page with "Category:Gene == Gene Ec-04_002150 == * left end position: ** 2421461 * transcription direction: ** POSITIVE * right end position: ** 2427338 * centisome position: ** 37.1...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=LUMAZINESYN-RXN LUMAZINESYN-RXN] ==
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== Gene Ec-04_002150 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 2421461
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* common name:
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* transcription direction:
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** 6,7-dimethyl-8-ribityllumazine synthase
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/2.5.1.78 EC-2.5.1.78]
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** 2427338
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* centisome position:
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** 37.185448   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0015_0045
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** Esi0015_0045
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** NIMA
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[PROTEIN-KINASE-RXN]]
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** 1 [[AMINO-RIBOSYLAMINO-1H-3H-PYR-DIONE]][c] '''+''' 1 [[DIHYDROXY-BUTANONE-P]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[DIMETHYL-D-RIBITYL-LUMAZINE]][c] '''+''' 2 [[WATER]][c]
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* With common name(s):
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** 1 5-amino-6-(D-ribitylamino)uracil[c] '''+''' 1 1-deoxy-L-glycero-tetrulose 4-phosphate[c] '''=>''' 1 H+[c] '''+''' 1 phosphate[c] '''+''' 1 6,7-dimethyl-8-(1-D-ribityl)lumazine[c] '''+''' 2 H2O[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-27_002140]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[PWY-6167]], flavin biosynthesis II (archaea): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6167 PWY-6167]
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** '''4''' reactions found over '''10''' reactions in the full pathway
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* [[PWY-6168]], flavin biosynthesis III (fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6168 PWY-6168]
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** '''6''' reactions found over '''9''' reactions in the full pathway
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* [[RIBOSYN2-PWY]], flavin biosynthesis I (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=RIBOSYN2-PWY RIBOSYN2-PWY]
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** '''8''' reactions found over '''9''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: go-term
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== Pathways associated ==
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=2421461}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=26152 26152]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=2427338}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04457 R04457]
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{{#set: centisome position=37.185448    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Esi_0015_0045|Esi0015_0045|NIMA}}
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{{#set: common name=6,7-dimethyl-8-ribityllumazine synthase}}
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{{#set: reaction associated=PROTEIN-KINASE-RXN}}
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{{#set: ec number=EC-2.5.1.78}}
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{{#set: gene associated=Ec-27_002140}}
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{{#set: in pathway=PWY-6167|PWY-6168|RIBOSYN2-PWY}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 20:40, 21 March 2018

Gene Ec-04_002150

  • left end position:
    • 2421461
  • transcription direction:
    • POSITIVE
  • right end position:
    • 2427338
  • centisome position:
    • 37.185448
  • Synonym(s):
    • Esi_0015_0045
    • Esi0015_0045
    • NIMA

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-04_002150&oldid=28608"