Difference between revisions of "Ec-06 005070"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHENYLALANINE--TRNA-LIGASE-RXN PHENYLALANINE--TRNA-LIGASE-RXN] == * direction: ** LEFT-TO-RIGHT * c...")
(Created page with "Category:Gene == Gene Ec-06_005070 == * left end position: ** 4263495 * transcription direction: ** NEGATIVE * right end position: ** 4264268 * centisome position: ** 48.6...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHENYLALANINE--TRNA-LIGASE-RXN PHENYLALANINE--TRNA-LIGASE-RXN] ==
+
== Gene Ec-06_005070 ==
−
* direction:
+
* left end position:
−
** LEFT-TO-RIGHT
+
** 4263495
−
* common name:
+
* transcription direction:
−
** Phenylalanine--tRNA ligase
+
** NEGATIVE
−
** tRNA-binding arm
+
* right end position:
−
** phenylalanine-tRNA ligase
+
** 4264268
−
* ec number:
+
* centisome position:
−
** [http://enzyme.expasy.org/EC/6.1.1.20 EC-6.1.1.20]
+
** 48.68249   
 
* Synonym(s):
 
* Synonym(s):
 +
** Esi_0052_0167
 +
** Esi0052_0167
 +
** Lipase
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[RXN-12086]]
−
** 1 [[PHE]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[PHE-tRNAs]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[Charged-PHE-tRNAs]][c] '''+''' 1 [[AMP]][c]
+
** Source: [[annotation-esiliculosus_genome]]
−
* With common name(s):
+
*** Assignment: ec-number
−
** 1 L-phenylalanine[c] '''+''' 1 ATP[c] '''+''' 1 H+[c] '''+''' 1 a tRNAphe[c] '''=>''' 1 diphosphate[c] '''+''' 1 an L-phenylalanyl-[tRNAphe][c] '''+''' 1 AMP[c]
+
* Reaction: [[RXN-12579]]
−
 
+
** Source: [[annotation-esiliculosus_genome]]
−
== Genes associated with this reaction  ==
+
*** Assignment: ec-number
−
Genes have been associated with this reaction based on different elements listed below.
+
* Reaction: [[TRIACYLGLYCEROL-LIPASE-RXN]]
−
* [[Ec-02_005310]]
+
−
** ESILICULOSUS_GENOME
+
−
***GO-TERM
+
−
* [[Ec-06_008260]]
+
−
** ESILICULOSUS_GENOME
+
−
***EC-NUMBER
+
−
* [[Ec-27_001900]]
+
−
** ESILICULOSUS_GENOME
+
−
***EC-NUMBER
+
−
* [[Ec-15_003330]]
+
−
** ESILICULOSUS_GENOME
+
−
***EC-NUMBER
+
−
== Pathways  ==
+
−
* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
+
−
** '''21''' reactions found over '''21''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* Category: [[annotation]]
+
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
−
*** Tool: [[pathwaytools]]
+
*** Assignment: ec-number
 +
== Pathways associated ==
 +
* [[LIPAS-PWY]]
 +
* [[PWY-6857]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: left end position=4263495}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19413 19413]
+
{{#set: transcription direction=NEGATIVE}}
−
* LIGAND-RXN:
+
{{#set: right end position=4264268}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R03660 R03660]
+
{{#set: centisome position=48.68249    }}
−
* UNIPROT:
+
{{#set: common name=Esi_0052_0167|Esi0052_0167|Lipase}}
−
** [http://www.uniprot.org/uniprot/P94283 P94283]
+
{{#set: reaction associated=RXN-12086|RXN-12579|TRIACYLGLYCEROL-LIPASE-RXN}}
−
** [http://www.uniprot.org/uniprot/Q9ZDB4 Q9ZDB4]
+
{{#set: pathway associated=LIPAS-PWY|PWY-6857}}
−
** [http://www.uniprot.org/uniprot/Q9WZS9 Q9WZS9]
+
−
** [http://www.uniprot.org/uniprot/Q9PP34 Q9PP34]
+
−
** [http://www.uniprot.org/uniprot/P56145 P56145]
+
−
** [http://www.uniprot.org/uniprot/O67620 O67620]
+
−
** [http://www.uniprot.org/uniprot/O73984 O73984]
+
−
** [http://www.uniprot.org/uniprot/Q9Z6R6 Q9Z6R6]
+
−
** [http://www.uniprot.org/uniprot/Q58508 Q58508]
+
−
** [http://www.uniprot.org/uniprot/P56146 P56146]
+
−
** [http://www.uniprot.org/uniprot/O27545 O27545]
+
−
** [http://www.uniprot.org/uniprot/O26837 O26837]
+
−
** [http://www.uniprot.org/uniprot/O58391 O58391]
+
−
** [http://www.uniprot.org/uniprot/O83938 O83938]
+
−
** [http://www.uniprot.org/uniprot/P47436 P47436]
+
−
** [http://www.uniprot.org/uniprot/O67087 O67087]
+
−
** [http://www.uniprot.org/uniprot/O83059 O83059]
+
−
** [http://www.uniprot.org/uniprot/O84843 O84843]
+
−
** [http://www.uniprot.org/uniprot/Q9UYX3 Q9UYX3]
+
−
** [http://www.uniprot.org/uniprot/Q9Z7W0 Q9Z7W0]
+
−
** [http://www.uniprot.org/uniprot/Q9PJR8 Q9PJR8]
+
−
** [http://www.uniprot.org/uniprot/P47437 P47437]
+
−
** [http://www.uniprot.org/uniprot/Q9ZKF9 Q9ZKF9]
+
−
** [http://www.uniprot.org/uniprot/Q9UYX2 Q9UYX2]
+
−
** [http://www.uniprot.org/uniprot/Q9ZKF8 Q9ZKF8]
+
−
** [http://www.uniprot.org/uniprot/Q9JR76 Q9JR76]
+
−
** [http://www.uniprot.org/uniprot/Q57911 Q57911]
+
−
** [http://www.uniprot.org/uniprot/P43819 P43819]
+
−
** [http://www.uniprot.org/uniprot/P94282 P94282]
+
−
** [http://www.uniprot.org/uniprot/O84481 O84481]
+
−
** [http://www.uniprot.org/uniprot/Q9ZDB5 Q9ZDB5]
+
−
** [http://www.uniprot.org/uniprot/Q9WZS8 Q9WZS8]
+
−
** [http://www.uniprot.org/uniprot/Q9RRX8 Q9RRX8]
+
−
** [http://www.uniprot.org/uniprot/Q9PP35 Q9PP35]
+
−
** [http://www.uniprot.org/uniprot/P43820 P43820]
+
−
** [http://www.uniprot.org/uniprot/Q46107 Q46107]
+
−
** [http://www.uniprot.org/uniprot/P15434 P15434]
+
−
** [http://www.uniprot.org/uniprot/Q5SGX1 Q5SGX1]
+
−
** [http://www.uniprot.org/uniprot/P37984 P37984]
+
−
** [http://www.uniprot.org/uniprot/P51346 P51346]
+
−
** [http://www.uniprot.org/uniprot/P75563 P75563]
+
−
** [http://www.uniprot.org/uniprot/P75564 P75564]
+
−
** [http://www.uniprot.org/uniprot/Q55187 Q55187]
+
−
** [http://www.uniprot.org/uniprot/P95960 P95960]
+
−
** [http://www.uniprot.org/uniprot/P95961 P95961]
+
−
** [http://www.uniprot.org/uniprot/Q49032 Q49032]
+
−
** [http://www.uniprot.org/uniprot/P08312 P08312]
+
−
** [http://www.uniprot.org/uniprot/P07395 P07395]
+
−
** [http://www.uniprot.org/uniprot/O42870 O42870]
+
−
** [http://www.uniprot.org/uniprot/O13432 O13432]
+
−
** [http://www.uniprot.org/uniprot/Q9GYS8 Q9GYS8]
+
−
** [http://www.uniprot.org/uniprot/O42849 O42849]
+
−
** [http://www.uniprot.org/uniprot/P17921 P17921]
+
−
** [http://www.uniprot.org/uniprot/P17922 P17922]
+
−
** [http://www.uniprot.org/uniprot/P15625 P15625]
+
−
** [http://www.uniprot.org/uniprot/P08425 P08425]
+
−
** [http://www.uniprot.org/uniprot/P15624 P15624]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=Phenylalanine--tRNA ligase}}
+
−
{{#set: common name=tRNA-binding arm}}
+
−
{{#set: common name=phenylalanine-tRNA ligase}}
+
−
{{#set: ec number=EC-6.1.1.20}}
+
−
{{#set: gene associated=Ec-02_005310|Ec-06_008260|Ec-27_001900|Ec-15_003330}}
+
−
{{#set: in pathway=TRNA-CHARGING-PWY}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction source=annotation-esiliculosus_genome}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+

Latest revision as of 20:40, 21 March 2018

Gene Ec-06_005070

  • left end position:
    • 4263495
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 4264268
  • centisome position:
    • 48.68249
  • Synonym(s):
    • Esi_0052_0167
    • Esi0052_0167
    • Lipase

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-06_005070&oldid=28614"