Difference between revisions of "RXN-12002"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=OXALO-SUCCINATE OXALO-SUCCINATE] == * smiles: ** C(C([O-])=O)C(C(C(=O)[O-])=O)C([O-])=O * inchi...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12002 RXN-12002] == * direction: ** LEFT-TO-RIGHT * common name: ** Adenylate kinase/UMP-CMP ki...")
 
(One intermediate revision by the same user not shown)
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=OXALO-SUCCINATE OXALO-SUCCINATE] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12002 RXN-12002] ==
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* smiles:
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* direction:
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** C(C([O-])=O)C(C(C(=O)[O-])=O)C([O-])=O
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=UFSCUAXLTRFIDC-UHFFFAOYSA-K
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* common name:
 
* common name:
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** oxalosuccinate
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** Adenylate kinase/UMP-CMP kinase
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* molecular weight:
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** Aspartate/glutamate/uridylate kinase
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** 187.085   
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** aspartate/glutamate/uridylate kinase
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** cytidylate kinase
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* ec number:
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** [http://enzyme.expasy.org/EC/2.7.4.22 EC-2.7.4.22]
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** [http://enzyme.expasy.org/EC/2.7.4.14 EC-2.7.4.14]
 
* Synonym(s):
 
* Synonym(s):
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** oxalo-succ
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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== Reaction(s) known to produce the compound ==
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* With identifiers:
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== Reaction(s) of unknown directionality ==
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** 1 [[ATP]][c] '''+''' 1 [[UMP]][c] '''=>''' 1 [[UDP]][c] '''+''' 1 [[ADP]][c]
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* [[RXN-8642]]
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* With common name(s):
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* [[RXN-9951]]
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** 1 ATP[c] '''+''' 1 UMP[c] '''=>''' 1 UDP[c] '''+''' 1 ADP[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-06_003080]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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** Source: [[orthology-aragem]]
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* Gene: [[Ec-27_003730]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-16_005090]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-07_003680]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-24_000610]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-14_004920]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[PWY-7176]], UTP and CTP de novo biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7176 PWY-7176]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* LIGAND-CPD:
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* RHEA:
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** [http://www.genome.jp/dbget-bin/www_bget?C05379 C05379]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24400 24400]
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* CHEBI:
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* LIGAND-RXN:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=58931 58931]
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** [http://www.genome.jp/dbget-bin/www_bget?R00158 R00158]
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* METABOLIGHTS : MTBLC58931
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{{#set: direction=LEFT-TO-RIGHT}}
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* PUBCHEM:
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{{#set: common name=Adenylate kinase/UMP-CMP kinase}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=25244267 25244267]
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{{#set: common name=Aspartate/glutamate/uridylate kinase}}
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* HMDB : HMDB03974
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{{#set: common name=aspartate/glutamate/uridylate kinase}}
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{{#set: smiles=C(C([O-])=O)C(C(C(=O)[O-])=O)C([O-])=O}}
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{{#set: common name=cytidylate kinase}}
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{{#set: inchi key=InChIKey=UFSCUAXLTRFIDC-UHFFFAOYSA-K}}
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{{#set: ec number=EC-2.7.4.22}}
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{{#set: common name=oxalosuccinate}}
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{{#set: ec number=EC-2.7.4.14}}
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{{#set: molecular weight=187.085    }}
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{{#set: gene associated=Ec-06_003080|Ec-27_003730|Ec-16_005090|Ec-07_003680|Ec-24_000610|Ec-14_004920}}
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{{#set: common name=oxalo-succ}}
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{{#set: in pathway=PWY-7176}}
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{{#set: reversible reaction associated=RXN-8642|RXN-9951}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:40, 21 March 2018

Reaction RXN-12002

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Adenylate kinase/UMP-CMP kinase
    • Aspartate/glutamate/uridylate kinase
    • aspartate/glutamate/uridylate kinase
    • cytidylate kinase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 UMP[c] => 1 UDP[c] + 1 ADP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7176, UTP and CTP de novo biosynthesis: PWY-7176
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links







Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-12002&oldid=28631"