Difference between revisions of "Ec-08 003510"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=AMINEOXID-RXN AMINEOXID-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Aliphatic-amine oxi...")
 
(Created page with "Category:Gene == Gene Ec-08_003510 == * left end position: ** 3317721 * transcription direction: ** NEGATIVE * right end position: ** 3322333 * centisome position: ** 49.5...")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=AMINEOXID-RXN AMINEOXID-RXN] ==
+
== Gene Ec-08_003510 ==
−
* direction:
+
* left end position:
−
** LEFT-TO-RIGHT
+
** 3317721
−
* common name:
+
* transcription direction:
−
** Aliphatic-amine oxidase
+
** NEGATIVE
−
** primary amine oxidase
+
* right end position:
−
* ec number:
+
** 3322333
−
** [http://enzyme.expasy.org/EC/1.4.3.21 EC-1.4.3.21]
+
* centisome position:
 +
** 49.539917   
 
* Synonym(s):
 
* Synonym(s):
 +
** Esi_0126_0075
 +
** Esi0126_0075
 +
** IDS2
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[1.21.3.1-RXN]]
−
** 1 [[Aliphatic-Amines]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 1 [[Aldehydes]][c]
+
** Source: [[annotation-esiliculosus_genome]]
−
* With common name(s):
+
*** Assignment: automated-name-match
−
** 1 an aliphatic amine[c] '''+''' 1 H2O[c] '''+''' 1 oxygen[c] '''=>''' 1 ammonium[c] '''+''' 1 hydrogen peroxide[c] '''+''' 1 an aldehyde[c]
+
* Reaction: [[NARINGENIN-3-DIOXYGENASE-RXN]]
−
 
+
** Source: [[orthology-aragem]]
−
== Genes associated with this reaction  ==
+
* Reaction: [[RXN-113]]
−
Genes have been associated with this reaction based on different elements listed below.
+
** Source: [[orthology-aragem]]
−
* [[Ec-15_002910]]
+
* Reaction: [[RXN-115]]
−
** ESILICULOSUS_GENOME
+
** Source: [[orthology-aragem]]
−
***GO-TERM
+
* Reaction: [[RXN-171]]
−
* [[Ec-15_002920]]
+
** Source: [[orthology-aragem]]
−
** ESILICULOSUS_GENOME
+
* Reaction: [[RXN-527]]
−
***GO-TERM
+
** Source: [[orthology-aragem]]
−
== Pathways ==
+
* Reaction: [[RXN-602]]
−
== Reconstruction information  ==
+
** Source: [[orthology-aragem]]
−
* [[annotation]]:
+
* Reaction: [[RXN-6550]]
−
** [[pathwaytools]]:
+
** Source: [[orthology-aragem]]
−
*** [[esiliculosus_genome]]
+
* Reaction: [[RXN-7648]]
 +
** Source: [[orthology-aragem]]
 +
* Reaction: [[RXN-7775]]
 +
** Source: [[orthology-aragem]]
 +
* Reaction: [[RXN-7922]]
 +
** Source: [[orthology-aragem]]
 +
* Reaction: [[RXN-8450]]
 +
** Source: [[orthology-aragem]]
 +
* Reaction: [[RXN1F-162]]
 +
** Source: [[orthology-aragem]]
 +
* Reaction: [[RXN1F-163]]
 +
** Source: [[orthology-aragem]]
 +
* Reaction: [[RXN1F-165]]
 +
** Source: [[orthology-aragem]]
 +
* Reaction: [[RXN1F-167]]
 +
** Source: [[orthology-aragem]]
 +
* Reaction: [[RXN1F-168]]
 +
** Source: [[orthology-aragem]]
 +
* Reaction: [[RXN1F-93]]
 +
** Source: [[orthology-aragem]]
 +
== Pathways associated ==
 +
* [[PWY-5059]]
 +
* [[PWY-5629]]
 +
* [[PWY1F-FLAVSYN]]
 +
* [[PWY-6787]]
 +
* [[PWY-5035]]
 +
* [[PWY-5390]]
 +
* [[PWY-5391]]
 +
* [[PWY-5070]]
 +
* [[PWY-5152]]
 +
* [[PWY-3101]]
 +
* [[PWY1F-823]]
 +
* [[PWY-102]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: left end position=3317721}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16153 16153]
+
{{#set: transcription direction=NEGATIVE}}
−
* UNIPROT:
+
{{#set: right end position=3322333}}
−
** [http://www.uniprot.org/uniprot/Q7M2P5 Q7M2P5]
+
{{#set: centisome position=49.539917    }}
−
** [http://www.uniprot.org/uniprot/Q9TRK6 Q9TRK6]
+
{{#set: common name=Esi_0126_0075|Esi0126_0075|IDS2}}
−
** [http://www.uniprot.org/uniprot/Q07123 Q07123]
+
{{#set: reaction associated=1.21.3.1-RXN|NARINGENIN-3-DIOXYGENASE-RXN|RXN-113|RXN-115|RXN-171|RXN-527|RXN-602|RXN-6550|RXN-7648|RXN-7775|RXN-7922|RXN-8450|RXN1F-162|RXN1F-163|RXN1F-165|RXN1F-167|RXN1F-168|RXN1F-93}}
−
** [http://www.uniprot.org/uniprot/P19801 P19801]
+
{{#set: pathway associated=PWY-5059|PWY-5629|PWY1F-FLAVSYN|PWY-6787|PWY-5035|PWY-5390|PWY-5391|PWY-5070|PWY-5152|PWY-3101|PWY1F-823|PWY-102}}
−
** [http://www.uniprot.org/uniprot/Q29437 Q29437]
+
−
** [http://www.uniprot.org/uniprot/Q59118 Q59118]
+
−
** [http://www.uniprot.org/uniprot/Q9TRK5 Q9TRK5]
+
−
** [http://www.uniprot.org/uniprot/Q9TRC7 Q9TRC7]
+
−
** [http://www.uniprot.org/uniprot/Q43077 Q43077]
+
−
** [http://www.uniprot.org/uniprot/P46883 P46883]
+
−
** [http://www.uniprot.org/uniprot/Q16853 Q16853]
+
−
** [http://www.uniprot.org/uniprot/Q9SXW5 Q9SXW5]
+
−
** [http://www.uniprot.org/uniprot/P12807 P12807]
+
−
** [http://www.uniprot.org/uniprot/P49252 P49252]
+
−
** [http://www.uniprot.org/uniprot/P36633 P36633]
+
−
** [http://www.uniprot.org/uniprot/Q7M504 Q7M504]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=Aliphatic-amine oxidase}}
+
−
{{#set: common name=primary amine oxidase}}
+
−
{{#set: ec number=EC-1.4.3.21}}
+
−
{{#set: gene associated=Ec-15_002910|Ec-15_002920}}
+
−
{{#set: in pathway=}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=esiliculosus_genome}}
+

Latest revision as of 20:41, 21 March 2018

Gene Ec-08_003510

  • left end position:
    • 3317721
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 3322333
  • centisome position:
    • 49.539917
  • Synonym(s):
    • Esi_0126_0075
    • Esi0126_0075
    • IDS2

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-08_003510&oldid=28667"