Difference between revisions of "ALANINE--TRNA-LIGASE-RXN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHORIBOSYL-CARBOXY-AMINOIMIDAZOLE PHOSPHORIBOSYL-CARBOXY-AMINOIMIDAZOLE] == * smiles: ** C(...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ALANINE--TRNA-LIGASE-RXN ALANINE--TRNA-LIGASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name:...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHORIBOSYL-CARBOXY-AMINOIMIDAZOLE PHOSPHORIBOSYL-CARBOXY-AMINOIMIDAZOLE] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ALANINE--TRNA-LIGASE-RXN ALANINE--TRNA-LIGASE-RXN] ==
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* smiles:
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* direction:
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** C(OP([O-])([O-])=O)C2(C(O)C(O)C(N1(C=NC(C([O-])=O)=C(N)1))O2)
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=XFVULMDJZXYMSG-ZIYNGMLESA-K
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* common name:
 
* common name:
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** 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate
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** alanine-tRNA ligase
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* molecular weight:
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** Alanyl-tRNA Synthetase
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** 336.174   
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* ec number:
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** [http://enzyme.expasy.org/EC/6.1.1.7 EC-6.1.1.7]
 
* Synonym(s):
 
* Synonym(s):
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** 1-(5-phosphoribosyl)-4-carboxy-5-aminoimidazole
 
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** 5'-P-ribosyl-4-carboxy-5-aminoimidazole
 
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** 5'-phosphoribosyl-4-carboxy-5-aminoimidazole
 
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** 5-phosphoribosyl-4-carboxy-5-aminoimidazole
 
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** 1-(5'-phosphoribosyl)-5-amino-4-imidazole carboxylate
 
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** 1-(5'-phosphoribosyl)-4-carboxy-5-aminoimidazole
 
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** CAIR
 
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** 4-carboxyaminoimidazole ribonucleotide
 
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** phosphoribosyl-carboxy-aminoimidazole
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[SAICARSYN-RXN]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[PROTON]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[L-ALPHA-ALANINE]][c] '''+''' 1 [[ALA-tRNAs]][c] '''=>''' 1 [[Charged-ALA-tRNAs]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[AMP]][c]
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* [[AIRCARBOXY-RXN]]
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 H+[c] '''+''' 1 ATP[c] '''+''' 1 L-alanine[c] '''+''' 1 a tRNAala[c] '''=>''' 1 an L-alanyl-[tRNAala][c] '''+''' 1 diphosphate[c] '''+''' 1 AMP[c]
 +
 
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-20_000890]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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* Gene: [[Ec-07_007070]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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* Gene: [[Ec-01_006770]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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== Pathways  ==
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* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
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** '''21''' reactions found over '''21''' reactions in the full pathway
 +
== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* BIGG : 44477
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* RHEA:
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* PUBCHEM:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12540 12540]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=24916886 24916886]
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* LIGAND-RXN:
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* HMDB : HMDB06273
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** [http://www.genome.jp/dbget-bin/www_bget?R03038 R03038]
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* LIGAND-CPD:
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* UNIPROT:
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** [http://www.genome.jp/dbget-bin/www_bget?C04751 C04751]
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** [http://www.uniprot.org/uniprot/P56452 P56452]
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* CHEBI:
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** [http://www.uniprot.org/uniprot/O27718 O27718]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=58564 58564]
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** [http://www.uniprot.org/uniprot/O34526 O34526]
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* METABOLIGHTS : MTBLC58564
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** [http://www.uniprot.org/uniprot/P47534 P47534]
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{{#set: smiles=C(OP([O-])([O-])=O)C2(C(O)C(O)C(N1(C=NC(C([O-])=O)=C(N)1))O2)}}
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** [http://www.uniprot.org/uniprot/O58035 O58035]
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{{#set: inchi key=InChIKey=XFVULMDJZXYMSG-ZIYNGMLESA-K}}
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** [http://www.uniprot.org/uniprot/Q9PI05 Q9PI05]
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{{#set: common name=5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate}}
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** [http://www.uniprot.org/uniprot/Q9JTG4 Q9JTG4]
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{{#set: molecular weight=336.174    }}
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** [http://www.uniprot.org/uniprot/Q57984 Q57984]
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{{#set: common name=1-(5-phosphoribosyl)-4-carboxy-5-aminoimidazole|5'-P-ribosyl-4-carboxy-5-aminoimidazole|5'-phosphoribosyl-4-carboxy-5-aminoimidazole|5-phosphoribosyl-4-carboxy-5-aminoimidazole|1-(5'-phosphoribosyl)-5-amino-4-imidazole carboxylate|1-(5'-phosphoribosyl)-4-carboxy-5-aminoimidazole|CAIR|4-carboxyaminoimidazole ribonucleotide|phosphoribosyl-carboxy-aminoimidazole}}
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** [http://www.uniprot.org/uniprot/O51238 O51238]
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{{#set: consumed by=SAICARSYN-RXN}}
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** [http://www.uniprot.org/uniprot/Q9CEW0 Q9CEW0]
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{{#set: produced by=AIRCARBOXY-RXN}}
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** [http://www.uniprot.org/uniprot/O83980 O83980]
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** [http://www.uniprot.org/uniprot/Q9X1B6 Q9X1B6]
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** [http://www.uniprot.org/uniprot/Q9ZJY5 Q9ZJY5]
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** [http://www.uniprot.org/uniprot/O67323 O67323]
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** [http://www.uniprot.org/uniprot/Q9ZCA4 Q9ZCA4]
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** [http://www.uniprot.org/uniprot/Q9Z714 Q9Z714]
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** [http://www.uniprot.org/uniprot/P49588 P49588]
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** [http://www.uniprot.org/uniprot/P43815 P43815]
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** [http://www.uniprot.org/uniprot/P50475 P50475]
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** [http://www.uniprot.org/uniprot/P24075 P24075]
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** [http://www.uniprot.org/uniprot/P27866 P27866]
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** [http://www.uniprot.org/uniprot/P35029 P35029]
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** [http://www.uniprot.org/uniprot/P40825 P40825]
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** [http://www.uniprot.org/uniprot/P75368 P75368]
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** [http://www.uniprot.org/uniprot/Q48976 Q48976]
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** [http://www.uniprot.org/uniprot/P00957 P00957]
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** [http://www.uniprot.org/uniprot/P21894 P21894]
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** [http://www.uniprot.org/uniprot/O50189 O50189]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=alanine-tRNA ligase}}
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{{#set: common name=Alanyl-tRNA Synthetase}}
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{{#set: ec number=EC-6.1.1.7}}
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{{#set: gene associated=Ec-20_000890|Ec-07_007070|Ec-01_006770}}
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{{#set: in pathway=TRNA-CHARGING-PWY}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:41, 21 March 2018

Reaction ALANINE--TRNA-LIGASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • alanine-tRNA ligase
    • Alanyl-tRNA Synthetase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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