Difference between revisions of "Ec-10 003020"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN] == * direction: ** LEFT-TO...")
(Created page with "Category:Gene == Gene Ec-10_003020 == * left end position: ** 3087984 * transcription direction: ** NEGATIVE * right end position: ** 3098772 * centisome position: ** 47.5...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN PYRUVATEORTHOPHOSPHATE-DIKINASE-RXN] ==
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== Gene Ec-10_003020 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 3087984
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* common name:
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* transcription direction:
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** Pyruvate/Phosphoenolpyruvate kinase-like domain
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** NEGATIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/2.7.9.1 EC-2.7.9.1]
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** 3098772
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* centisome position:
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** 47.500248   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0174_0068
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** Esi0174_0068
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** FPPS
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[FPPSYN-RXN]]
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** 1 [[PYRUVATE]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[PHOSPHO-ENOL-PYRUVATE]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[PROTON]][c]
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* With common name(s):
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** 1 pyruvate[c] '''+''' 1 phosphate[c] '''+''' 1 ATP[c] '''=>''' 1 diphosphate[c] '''+''' 1 phosphoenolpyruvate[c] '''+''' 1 AMP[c] '''+''' 1 H+[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-18_001310]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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*** Assignment: ec-number
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** Source: [[orthology-aragem]]
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* Reaction: [[GPPSYN-RXN]]
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== Pathways  ==
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* [[PWY-6549]], L-glutamine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6549 PWY-6549]
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** '''8''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-7117]], C4 photosynthetic carbon assimilation cycle, PEPCK type: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7117 PWY-7117]
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** '''9''' reactions found over '''10''' reactions in the full pathway
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* [[PWY-241]], C4 photosynthetic carbon assimilation cycle, NADP-ME type: [http://metacyc.org/META/NEW-IMAGE?object=PWY-241 PWY-241]
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** '''4''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-7115]], C4 photosynthetic carbon assimilation cycle, NAD-ME type: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7115 PWY-7115]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: automated-name-match
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== Pathways associated ==
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* [[PWY-7736]]
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* [[PWY-6859]]
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* [[PWY-7709]]
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* [[PWY-6383]]
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* [[PWY-7182]]
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* [[PWY-7659]]
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* [[PWY-5123]]
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* [[PWY-5122]]
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* [[PWY-7141]]
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* [[PWY-7102]]
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* [[PWY-7721]]
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* [[PWY-7410]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=3087984}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10756 10756]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=3098772}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00206 R00206]
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{{#set: centisome position=47.500248    }}
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* UNIPROT:
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{{#set: common name=Esi_0174_0068|Esi0174_0068|FPPS}}
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** [http://www.uniprot.org/uniprot/Q7M0I6 Q7M0I6]
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{{#set: reaction associated=FPPSYN-RXN|GPPSYN-RXN}}
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** [http://www.uniprot.org/uniprot/O23404 O23404]
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{{#set: pathway associated=PWY-7736|PWY-6859|PWY-7709|PWY-6383|PWY-7182|PWY-7659|PWY-5123|PWY-5122|PWY-7141|PWY-7102|PWY-7721|PWY-7410}}
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** [http://www.uniprot.org/uniprot/Q9WYA9 Q9WYA9]
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** [http://www.uniprot.org/uniprot/P22983 P22983]
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** [http://www.uniprot.org/uniprot/Q41846 Q41846]
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** [http://www.uniprot.org/uniprot/Q42367 Q42367]
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** [http://www.uniprot.org/uniprot/Q42368 Q42368]
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** [http://www.uniprot.org/uniprot/P22221 P22221]
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** [http://www.uniprot.org/uniprot/P37213 P37213]
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** [http://www.uniprot.org/uniprot/Q42736 Q42736]
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** [http://www.uniprot.org/uniprot/Q42910 Q42910]
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** [http://www.uniprot.org/uniprot/Q39734 Q39734]
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** [http://www.uniprot.org/uniprot/Q39735 Q39735]
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** [http://www.uniprot.org/uniprot/O24612 O24612]
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** [http://www.uniprot.org/uniprot/O85840 O85840]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Pyruvate/Phosphoenolpyruvate kinase-like domain}}
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{{#set: ec number=EC-2.7.9.1}}
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{{#set: gene associated=Ec-18_001310}}
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{{#set: in pathway=PWY-6549|PWY-7117|PWY-241|PWY-7115}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 20:42, 21 March 2018

Gene Ec-10_003020

  • left end position:
    • 3087984
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 3098772
  • centisome position:
    • 47.500248
  • Synonym(s):
    • Esi_0174_0068
    • Esi0174_0068
    • FPPS

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-10_003020&oldid=28816"