Difference between revisions of "RXN-7609"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene Ec-06_002120 == * left end position: ** 1524578 * transcription direction: ** POSITIVE * right end position: ** 1537517 * centisome position: ** 17.4...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7609 RXN-7609] == * direction: ** LEFT-TO-RIGHT * common name: ** 5'-nucleotidase * ec number:...")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Gene]]
+
[[Category:Reaction]]
−
== Gene Ec-06_002120 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7609 RXN-7609] ==
−
* left end position:
+
* direction:
−
** 1524578
+
** LEFT-TO-RIGHT
−
* transcription direction:
+
* common name:
−
** POSITIVE
+
** 5'-nucleotidase
−
* right end position:
+
* ec number:
−
** 1537517
+
** [http://enzyme.expasy.org/EC/3.1.3.5 EC-3.1.3.5]
−
* centisome position:
+
−
** 17.408314   
+
 
* Synonym(s):
 
* Synonym(s):
−
** Esi_0350_0019
 
−
** Esi0350_0019
 
  
−
== Reactions associated ==
+
== Reaction Formula ==
−
* [[DIACYLGLYKIN-RXN]]
+
* With identifiers:
−
** esiliculosus_genome
+
** 1 [[WATER]][c] '''+''' 1 [[GMP]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[GUANOSINE]][c]
−
***go-term
+
* With common name(s):
−
== Pathways associated ==
+
** 1 H2O[c] '''+''' 1 GMP[c] '''=>''' 1 phosphate[c] '''+''' 1 guanosine[c]
−
* [[PWY-7039]]
+
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Ec-05_000950]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-15_000820]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-12_005060]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
== Pathways ==
 +
* [[PWY-6608]], guanosine nucleotides degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6608 PWY-6608]
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-6607]], guanosine nucleotides degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6607 PWY-6607]
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-6606]], guanosine nucleotides degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6606 PWY-6606]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[annotation]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: left end position=1524578}}
+
* RHEA:
−
{{#set: transcription direction=POSITIVE}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27714 27714]
−
{{#set: right end position=1537517}}
+
* LIGAND-RXN:
−
{{#set: centisome position=17.408314    }}
+
** [http://www.genome.jp/dbget-bin/www_bget?R01227 R01227]
−
{{#set: common name=Esi_0350_0019|Esi0350_0019}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: reaction associated=DIACYLGLYKIN-RXN}}
+
{{#set: common name=5'-nucleotidase}}
−
{{#set: pathway associated=PWY-7039}}
+
{{#set: ec number=EC-3.1.3.5}}
 +
{{#set: gene associated=Ec-05_000950|Ec-15_000820|Ec-12_005060}}
 +
{{#set: in pathway=PWY-6608|PWY-6607|PWY-6606}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:42, 21 March 2018

Reaction RXN-7609

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 5'-nucleotidase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 GMP[c] => 1 phosphate[c] + 1 guanosine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6608, guanosine nucleotides degradation III: PWY-6608
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-6607, guanosine nucleotides degradation I: PWY-6607
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-6606, guanosine nucleotides degradation II: PWY-6606
    • 3 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-7609&oldid=28817"