Difference between revisions of "Ec-06 002460"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9533 RXN-9533] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/2....")
(Created page with "Category:Gene == Gene Ec-06_002460 == * left end position: ** 1789639 * transcription direction: ** POSITIVE * right end position: ** 1799033 * centisome position: ** 20.4...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9533 RXN-9533] ==
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== Gene Ec-06_002460 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 1789639
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
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** POSITIVE
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** [http://enzyme.expasy.org/EC/2.3.1.85 EC-2.3.1.85]
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* right end position:
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** [http://enzyme.expasy.org/EC/4.2.1.59 EC-4.2.1.59]
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** 1799033
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* centisome position:
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** 20.4349   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0384_0020
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** Esi0384_0020
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[GAMMA-GLUTAMYLCYCLOTRANSFERASE-RXN]]
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** 1 [[R-3-hydroxydodecanoyl-ACPs]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[Dodec-2-enoyl-ACPs]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: go-term
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** 1 a (3R)-3-hydroxydodecanoyl-[acp][c] '''=>''' 1 H2O[c] '''+''' 1 a (2E)-dodec-2-enoyl-[acp][c]
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* Reaction: [[RXN-15681]]
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** Source: [[annotation-esiliculosus_genome]]
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== Genes associated with this reaction  ==
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*** Assignment: automated-name-match
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== Pathways  ==
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== Pathways associated ==
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* [[PWY-5994]], palmitate biosynthesis I (animals and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5994 PWY-5994]
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* [[PWY-4041]]
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** '''20''' reactions found over '''31''' reactions in the full pathway
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* [[PWY-7533]]
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* [[PWY-5971]], palmitate biosynthesis II (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5971 PWY-5971]
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** '''28''' reactions found over '''31''' reactions in the full pathway
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* [[PWY-7664]], oleate biosynthesis IV (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7664 PWY-7664]
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** '''10''' reactions found over '''14''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[gap-filling]]
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** Source: [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
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*** Tool: [[meneco]]
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**** Comment: [[added for gapfilling]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=1789639}}
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{{#set: ec number=EC-2.3.1.86}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: ec number=EC-2.3.1.85}}
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{{#set: right end position=1799033}}
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{{#set: ec number=EC-4.2.1.59}}
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{{#set: centisome position=20.4349    }}
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{{#set: in pathway=PWY-5994|PWY-5971|PWY-7664}}
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{{#set: common name=Esi_0384_0020|Esi0384_0020}}
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{{#set: reconstruction category=gap-filling}}
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{{#set: reaction associated=GAMMA-GLUTAMYLCYCLOTRANSFERASE-RXN|RXN-15681}}
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{{#set: reconstruction source=gap-filling-gapfilling_solution_with_meneco_draft_medium}}
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{{#set: pathway associated=PWY-4041|PWY-7533}}
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{{#set: reconstruction tool=meneco}}
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{{#set: reconstruction comment=added for gapfilling}}
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Latest revision as of 20:43, 21 March 2018

Gene Ec-06_002460

  • left end position:
    • 1789639
  • transcription direction:
    • POSITIVE
  • right end position:
    • 1799033
  • centisome position:
    • 20.4349
  • Synonym(s):
    • Esi_0384_0020
    • Esi0384_0020

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-06_002460&oldid=28926"