Difference between revisions of "Ec-06 002840"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TYROSINE--TRNA-LIGASE-RXN TYROSINE--TRNA-LIGASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name...")
(Created page with "Category:Gene == Gene Ec-06_002840 == * left end position: ** 2108627 * transcription direction: ** NEGATIVE * right end position: ** 2118696 * centisome position: ** 24.0...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TYROSINE--TRNA-LIGASE-RXN TYROSINE--TRNA-LIGASE-RXN] ==
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== Gene Ec-06_002840 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 2108627
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* common name:
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* transcription direction:
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** Tyrosyl-tRNA synthetase
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** NEGATIVE
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** Tyrosine--tRNA ligase
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* right end position:
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* ec number:
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** 2118696
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** [http://enzyme.expasy.org/EC/6.1.1.1 EC-6.1.1.1]
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* centisome position:
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** 24.077248   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0165_0018
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** Esi0165_0018
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** PAO-like
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[RXN-13398]]
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** 1 [[TYR]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[TYR-tRNAs]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[Charged-TYR-tRNAs]][c] '''+''' 1 [[AMP]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: go-term
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** 1 L-tyrosine[c] '''+''' 1 ATP[c] '''+''' 1 a tRNAtyr[c] '''+''' 1 H+[c] '''=>''' 1 diphosphate[c] '''+''' 1 an L-tyrosyl-[tRNAtyr][c] '''+''' 1 AMP[c]
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* Reaction: [[RXN-7676]]
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** Source: [[annotation-esiliculosus_genome]]
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== Genes associated with this reaction  ==
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*** Assignment: go-term
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN-7677]]
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* [[Ec-18_001870]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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* [[Ec-01_009160]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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== Pathways  ==
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* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
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** '''21''' reactions found over '''21''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: go-term
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== Pathways associated ==
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* [[PWY-5068]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=2108627}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10220 10220]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=2118696}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02918 R02918]
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{{#set: centisome position=24.077248    }}
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* UNIPROT:
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{{#set: common name=Esi_0165_0018|Esi0165_0018|PAO-like}}
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** [http://www.uniprot.org/uniprot/P28669 P28669]
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{{#set: reaction associated=RXN-13398|RXN-7676|RXN-7677}}
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** [http://www.uniprot.org/uniprot/P22326 P22326]
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{{#set: pathway associated=PWY-5068}}
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** [http://www.uniprot.org/uniprot/P36421 P36421]
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** [http://www.uniprot.org/uniprot/P41256 P41256]
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** [http://www.uniprot.org/uniprot/O51343 O51343]
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** [http://www.uniprot.org/uniprot/Q9PN27 Q9PN27]
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** [http://www.uniprot.org/uniprot/Q9CIH5 Q9CIH5]
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** [http://www.uniprot.org/uniprot/Q9ZL69 Q9ZL69]
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** [http://www.uniprot.org/uniprot/P47693 P47693]
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** [http://www.uniprot.org/uniprot/Q9ZCZ4 Q9ZCZ4]
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** [http://www.uniprot.org/uniprot/P43836 P43836]
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** [http://www.uniprot.org/uniprot/O83806 O83806]
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** [http://www.uniprot.org/uniprot/Q57834 Q57834]
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** [http://www.uniprot.org/uniprot/P56417 P56417]
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** [http://www.uniprot.org/uniprot/O67632 O67632]
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** [http://www.uniprot.org/uniprot/O58739 O58739]
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** [http://www.uniprot.org/uniprot/Q9WYU8 Q9WYU8]
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** [http://www.uniprot.org/uniprot/O27795 O27795]
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** [http://www.uniprot.org/uniprot/O84065 O84065]
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** [http://www.uniprot.org/uniprot/Q9JVY6 Q9JVY6]
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** [http://www.uniprot.org/uniprot/P48527 P48527]
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** [http://www.uniprot.org/uniprot/Q49900 Q49900]
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** [http://www.uniprot.org/uniprot/P75122 P75122]
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** [http://www.uniprot.org/uniprot/P73141 P73141]
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** [http://www.uniprot.org/uniprot/P73144 P73144]
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** [http://www.uniprot.org/uniprot/P95982 P95982]
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** [http://www.uniprot.org/uniprot/P00952 P00952]
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** [http://www.uniprot.org/uniprot/P04077 P04077]
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** [http://www.uniprot.org/uniprot/P0AGJ9 P0AGJ9]
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** [http://www.uniprot.org/uniprot/P12063 P12063]
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** [http://www.uniprot.org/uniprot/P93363 P93363]
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** [http://www.uniprot.org/uniprot/O14055 O14055]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Tyrosyl-tRNA synthetase}}
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{{#set: common name=Tyrosine--tRNA ligase}}
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{{#set: ec number=EC-6.1.1.1}}
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{{#set: gene associated=Ec-18_001870|Ec-01_009160}}
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{{#set: in pathway=TRNA-CHARGING-PWY}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 20:43, 21 March 2018

Gene Ec-06_002840

  • left end position:
    • 2108627
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 2118696
  • centisome position:
    • 24.077248
  • Synonym(s):
    • Esi_0165_0018
    • Esi0165_0018
    • PAO-like

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-06_002840&oldid=28937"