Difference between revisions of "3.5.1.98-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14179 RXN-14179] == * direction: ** LEFT-TO-RIGHT * common name: ** Beta-glucosidase, family GH...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.5.1.98-RXN 3.5.1.98-RXN] == * direction: ** REVERSIBLE * common name: ** Histone deacetylase doma...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14179 RXN-14179] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.5.1.98-RXN 3.5.1.98-RXN] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** Beta-glucosidase, family GH3
+
** Histone deacetylase domain
−
** Beta-glucosidase, family GH1
+
** histone deacetylase
−
** Beta-glucosidase, family GH30
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.2.1.21 EC-3.2.1.21]
+
** [http://enzyme.expasy.org/EC/3.5.1.98 EC-3.5.1.98]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[WATER]][c] '''+''' 1 [[SCOPOLIN]][c] '''=>''' 1 [[SCOPOLETIN]][c] '''+''' 1 [[Glucopyranose]][c]
+
** 1 [[WATER]][c] '''+''' 1 [[Histone-Acetyl-Lysine]][c] '''<=>''' 1 [[Histone-L-lysine]][c] '''+''' 1 [[ACET]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H2O[c] '''+''' 1 scopolin[c] '''=>''' 1 scopoletin[c] '''+''' 1 D-glucopyranose[c]
+
** 1 H2O[c] '''+''' 1 a [histone]-N6-acetyl-L-lysine[c] '''<=>''' 1 a [histone]-L-lysine[c] '''+''' 1 acetate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Ec-26_002410]]
+
* Gene: [[Ec-05_003910]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
−
*** Assignment: EC-NUMBER
+
*** Assignment: AUTOMATED-NAME-MATCH
−
* Gene: [[Ec-07_001850]]
+
* Gene: [[Ec-06_004320]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
−
*** Assignment: EC-NUMBER
+
*** Assignment: AUTOMATED-NAME-MATCH
−
* Gene: [[Ec-07_005240]]
+
* Gene: [[Ec-05_003890]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
−
*** Assignment: EC-NUMBER
+
*** Assignment: AUTOMATED-NAME-MATCH
−
* Gene: [[Ec-20_004800]]
+
* Gene: [[Ec-10_001980]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
−
*** Assignment: EC-NUMBER
+
*** Assignment: AUTOMATED-NAME-MATCH
−
* Gene: [[Ec-04_002190]]
+
* Gene: [[Ec-28_001400]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
−
*** Assignment: EC-NUMBER
+
*** Assignment: GO-TERM
 +
* Gene: [[Ec-02_001000]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-05_006370]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 
== Pathways  ==
 
== Pathways  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
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*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: direction=REVERSIBLE}}
−
{{#set: common name=Beta-glucosidase, family GH3}}
+
{{#set: common name=Histone deacetylase domain}}
−
{{#set: common name=Beta-glucosidase, family GH1}}
+
{{#set: common name=histone deacetylase}}
−
{{#set: common name=Beta-glucosidase, family GH30}}
+
{{#set: ec number=EC-3.5.1.98}}
−
{{#set: ec number=EC-3.2.1.21}}
+
{{#set: gene associated=Ec-05_003910|Ec-06_004320|Ec-05_003890|Ec-10_001980|Ec-28_001400|Ec-02_001000|Ec-05_006370}}
−
{{#set: gene associated=Ec-26_002410|Ec-07_001850|Ec-07_005240|Ec-20_004800|Ec-04_002190}}
+
 
{{#set: in pathway=}}
 
{{#set: in pathway=}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:43, 21 March 2018

Reaction 3.5.1.98-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • Histone deacetylase domain
    • histone deacetylase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

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