Difference between revisions of "Ec-27 005030"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RIBOFLAVINSYNDEAM-RXN RIBOFLAVINSYNDEAM-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** dia...")
(Created page with "Category:Gene == Gene Ec-27_005030 == * left end position: ** 4554906 * transcription direction: ** NEGATIVE * right end position: ** 4563758 * centisome position: ** 70.6...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RIBOFLAVINSYNDEAM-RXN RIBOFLAVINSYNDEAM-RXN] ==
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== Gene Ec-27_005030 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 4554906
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* common name:
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* transcription direction:
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** diaminohydroxyphosphoribosylaminopyrimidine deaminase
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** NEGATIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/3.5.4.26 EC-3.5.4.26]
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** 4563758
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* centisome position:
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** 70.61971   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0000_0270
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** Esi0000_0270
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[GLUCOKIN-RXN]]
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** 1 [[DIAMINO-OH-PHOSPHORIBOSYLAMINO-PYR]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CPD-602]][c] '''+''' 1 [[AMMONIUM]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: go-term
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** 1 2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one[c] '''+''' 1 H2O[c] '''+''' 1 H+[c] '''=>''' 1 5-amino-6-(5-phospho-D-ribosylamino)uracil[c] '''+''' 1 ammonium[c]
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* Reaction: [[HEXOKINASE-RXN]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-07_005770]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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** [[pantograph]]-[[aragem]]
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== Pathways  ==
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* [[RIBOSYN2-PWY]], flavin biosynthesis I (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=RIBOSYN2-PWY RIBOSYN2-PWY]
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** '''8''' reactions found over '''9''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: automated-name-match
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== Pathways associated ==
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* [[TREDEGLOW-PWY]]
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* [[GLYCOCAT-PWY]]
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* [[PWY-621]]
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* [[PWY-7385]]
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* [[GLUCOSE1PMETAB-PWY]]
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* [[PWY0-1182]]
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* [[P124-PWY]]
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* [[PWY-5514]]
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* [[PWY-2722]]
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* [[PWY-7238]]
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* [[ANAGLYCOLYSIS-PWY]]
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* [[PWY-2723]]
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* [[P122-PWY]]
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* [[PWY-5661]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=4554906}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21868 21868]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=4563758}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03459 R03459]
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{{#set: centisome position=70.61971    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Esi_0000_0270|Esi0000_0270}}
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{{#set: common name=diaminohydroxyphosphoribosylaminopyrimidine deaminase}}
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{{#set: reaction associated=GLUCOKIN-RXN|HEXOKINASE-RXN}}
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{{#set: ec number=EC-3.5.4.26}}
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{{#set: pathway associated=TREDEGLOW-PWY|GLYCOCAT-PWY|PWY-621|PWY-7385|GLUCOSE1PMETAB-PWY|PWY0-1182|P124-PWY|PWY-5514|PWY-2722|PWY-7238|ANAGLYCOLYSIS-PWY|PWY-2723|P122-PWY|PWY-5661}}
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{{#set: gene associated=Ec-07_005770}}
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{{#set: in pathway=RIBOSYN2-PWY}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 20:43, 21 March 2018

Gene Ec-27_005030

  • left end position:
    • 4554906
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 4563758
  • centisome position:
    • 70.61971
  • Synonym(s):
    • Esi_0000_0270
    • Esi0000_0270

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-27_005030&oldid=28980"