Difference between revisions of "Ec-27 002470"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTSEMIALDEHYDROG-RXN GLUTSEMIALDEHYDROG-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [ht...")
(Created page with "Category:Gene == Gene Ec-27_002470 == * left end position: ** 2202215 * transcription direction: ** POSITIVE * right end position: ** 2208087 * centisome position: ** 34.1...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTSEMIALDEHYDROG-RXN GLUTSEMIALDEHYDROG-RXN] ==
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== Gene Ec-27_002470 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 2202215
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/1.2.1.41 EC-1.2.1.41]
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** POSITIVE
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* right end position:
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** 2208087
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* centisome position:
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** 34.14336   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0036_0144
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** Esi0036_0144
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[1.3.1.9-RXN]]
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** 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[L-GLUTAMATE-5-P]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[L-GLUTAMATE_GAMMA-SEMIALDEHYDE]][c] '''+''' 1 [[Pi]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 NADPH[c] '''+''' 1 H+[c] '''+''' 1 γ-L-glutamyl 5-phosphate[c] '''=>''' 1 NADP+[c] '''+''' 1 L-glutamate-5-semialdehyde[c] '''+''' 1 phosphate[c]
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* Reaction: [[ENOYL-ACP-REDUCT-NADH-RXN]]
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** Source: [[annotation-esiliculosus_genome]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RIBITOL-2-DEHYDROGENASE-RXN]]
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* [[Ec-07_007490]]
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** Source: [[annotation-esiliculosus_genome]]
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** [[pantograph]]-[[aragem]]
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*** Assignment: automated-name-match
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== Pathways  ==
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* Reaction: [[RXN-10062]]
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* [[PWY-6922]], L-Nδ-acetylornithine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6922 PWY-6922]
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** Source: [[annotation-esiliculosus_genome]]
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** '''6''' reactions found over '''7''' reactions in the full pathway
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*** Assignment: ec-number
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* [[PROSYN-PWY]], L-proline biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PROSYN-PWY PROSYN-PWY]
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* Reaction: [[RXN-10657]]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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** Source: [[annotation-esiliculosus_genome]]
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* [[PWY-3341]], L-proline biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3341 PWY-3341]
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*** Assignment: ec-number
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** '''5''' reactions found over '''5''' reactions in the full pathway
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* Reaction: [[RXN-10661]]
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* [[ARGININE-SYN4-PWY]], L-ornithine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=ARGININE-SYN4-PWY ARGININE-SYN4-PWY]
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** Source: [[annotation-esiliculosus_genome]]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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*** Assignment: ec-number
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* [[CITRULBIO-PWY]], L-citrulline biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=CITRULBIO-PWY CITRULBIO-PWY]
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* Reaction: [[RXN-11478]]
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** '''8''' reactions found over '''8''' reactions in the full pathway
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** Source: [[annotation-esiliculosus_genome]]
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== Reconstruction information  ==
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*** Assignment: ec-number
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* Category: [[orthology]]
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* Reaction: [[RXN-11482]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN-16620]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN-16624]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN-16628]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN-16632]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN-9558]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN-9635]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
 
** Source: [[orthology-aragem]]
 
** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Reaction: [[RXN-9657]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN-9658]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN-9659]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN-9660]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN-9661]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN-9662]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN-9663]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN0-2145]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN1G-395]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN1G-488]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN1G-526]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[PWY-6113]]
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* [[FASYN-ELONG-PWY]]
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* [[PWY-6519]]
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* [[PWY-6282]]
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* [[PWY-5973]]
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* [[PWY-5989]]
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* [[PWY-5971]]
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* [[PWYG-321]]
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* [[RIBITOLUTIL-PWY]]
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* [[PWY-7663]]
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* [[PWY-7664]]
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* [[PWY0-862]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=2202215}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19541 19541]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=2208087}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03313 R03313]
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{{#set: centisome position=34.14336    }}
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* UNIPROT:
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{{#set: common name=Esi_0036_0144|Esi0036_0144}}
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** [http://www.uniprot.org/uniprot/Q9JUK8 Q9JUK8]
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{{#set: reaction associated=1.3.1.9-RXN|ENOYL-ACP-REDUCT-NADH-RXN|RIBITOL-2-DEHYDROGENASE-RXN|RXN-10062|RXN-10657|RXN-10661|RXN-11478|RXN-11482|RXN-16620|RXN-16624|RXN-16628|RXN-16632|RXN-9558|RXN-9635|RXN-9657|RXN-9658|RXN-9659|RXN-9660|RXN-9661|RXN-9662|RXN-9663|RXN0-2145|RXN1G-395|RXN1G-488|RXN1G-526}}
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** [http://www.uniprot.org/uniprot/P45121 P45121]
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{{#set: pathway associated=PWY-6113|FASYN-ELONG-PWY|PWY-6519|PWY-6282|PWY-5973|PWY-5989|PWY-5971|PWYG-321|RIBITOLUTIL-PWY|PWY-7663|PWY-7664|PWY0-862}}
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** [http://www.uniprot.org/uniprot/P53000 P53000]
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** [http://www.uniprot.org/uniprot/P07004 P07004]
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** [http://www.uniprot.org/uniprot/P17857 P17857]
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** [http://www.uniprot.org/uniprot/P45638 P45638]
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** [http://www.uniprot.org/uniprot/P54885 P54885]
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** [http://www.uniprot.org/uniprot/O04226 O04226]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: ec number=EC-1.2.1.41}}
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{{#set: gene associated=Ec-07_007490}}
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{{#set: in pathway=PWY-6922|PROSYN-PWY|PWY-3341|ARGININE-SYN4-PWY|CITRULBIO-PWY}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-aragem}}
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−
{{#set: reconstruction tool=pantograph}}
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Latest revision as of 19:44, 21 March 2018

Gene Ec-27_002470

  • left end position:
    • 2202215
  • transcription direction:
    • POSITIVE
  • right end position:
    • 2208087
  • centisome position:
    • 34.14336
  • Synonym(s):
    • Esi_0036_0144
    • Esi0036_0144

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-27_002470&oldid=29030"