Difference between revisions of "RXN-14048"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=NAD-SYNTH-NH3-RXN NAD-SYNTH-NH3-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzym...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14048 RXN-14048] == * direction: ** LEFT-TO-RIGHT * common name: ** Pyridoxal phosphate-depende...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=NAD-SYNTH-NH3-RXN NAD-SYNTH-NH3-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14048 RXN-14048] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* ec number:
+
* common name:
−
** [http://enzyme.expasy.org/EC/6.3.1.5 EC-6.3.1.5]
+
** Pyridoxal phosphate-dependent transferase, major region, subdomain 1
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[DEAMIDO-NAD]][c] '''+''' 1 [[AMMONIUM]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[NAD]][c]
+
** 1 [[L-CYSTATHIONINE]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[CYS]][c] '''+''' 1 [[CPD-15056]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 nicotinate adenine dinucleotide[c] '''+''' 1 ammonium[c] '''+''' 1 ATP[c] '''=>''' 1 AMP[c] '''+''' 1 H+[c] '''+''' 1 diphosphate[c] '''+''' 1 NAD+[c]
+
** 1 L-cystathionine[c] '''=>''' 1 H+[c] '''+''' 1 L-cysteine[c] '''+''' 1 (2Z)-2-aminobut-2-enoate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Ec-12_003100]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PYRIDNUCSYN-PWY]], NAD biosynthesis I (from aspartate): [http://metacyc.org/META/NEW-IMAGE?object=PYRIDNUCSYN-PWY PYRIDNUCSYN-PWY]
+
* [[HOMOCYSDEGR-PWY]], L-cysteine biosynthesis III (from L-homocysteine): [http://metacyc.org/META/NEW-IMAGE?object=HOMOCYSDEGR-PWY HOMOCYSDEGR-PWY]
−
** '''6''' reactions found over '''6''' reactions in the full pathway
+
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-801]], L-homocysteine and L-cysteine interconversion: [http://metacyc.org/META/NEW-IMAGE?object=PWY-801 PWY-801]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
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== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21188 21188]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24913 24913]
−
* LIGAND-RXN:
+
−
** [http://www.genome.jp/dbget-bin/www_bget?R00189 R00189]
+
−
* UNIPROT:
+
−
** [http://www.uniprot.org/uniprot/P08164 P08164]
+
−
** [http://www.uniprot.org/uniprot/P18843 P18843]
+
−
** [http://www.uniprot.org/uniprot/Q03638 Q03638]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-6.3.1.5}}
+
{{#set: common name=Pyridoxal phosphate-dependent transferase, major region, subdomain 1}}
−
{{#set: in pathway=PYRIDNUCSYN-PWY}}
+
{{#set: gene associated=Ec-12_003100}}
 +
{{#set: in pathway=HOMOCYSDEGR-PWY|PWY-801}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:44, 21 March 2018

Reaction RXN-14048

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Pyridoxal phosphate-dependent transferase, major region, subdomain 1
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 L-cystathionine[c] => 1 H+[c] + 1 L-cysteine[c] + 1 (2Z)-2-aminobut-2-enoate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • HOMOCYSDEGR-PWY, L-cysteine biosynthesis III (from L-homocysteine): HOMOCYSDEGR-PWY
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-801, L-homocysteine and L-cysteine interconversion: PWY-801
    • 3 reactions found over 4 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-14048&oldid=29032"