Difference between revisions of "RXN-14048"

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(Created page with "Category:Gene == Gene Ec-08_001920 == * left end position: ** 1929867 * transcription direction: ** POSITIVE * right end position: ** 1941827 * centisome position: ** 28.8...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14048 RXN-14048] == * direction: ** LEFT-TO-RIGHT * common name: ** Pyridoxal phosphate-depende...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Gene]]
+
[[Category:Reaction]]
== Gene Ec-08_001920 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14048 RXN-14048] ==
* left end position:
+
* direction:
** 1929867
+
** LEFT-TO-RIGHT
* transcription direction:
+
* common name:
** POSITIVE
+
** Pyridoxal phosphate-dependent transferase, major region, subdomain 1
* right end position:
+
** 1941827
+
* centisome position:
+
** 28.816605   
+
 
* Synonym(s):
 
* Synonym(s):
** Esi_0007_0100
 
** Esi0007_0100
 
** PP
 
  
== Reactions associated ==
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== Reaction Formula ==
* [[3.1.3.16-RXN]]
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* With identifiers:
** esiliculosus_genome
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** 1 [[L-CYSTATHIONINE]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[CYS]][c] '''+''' 1 [[CPD-15056]][c]
***ec-number
+
* With common name(s):
== Pathways associated ==
+
** 1 L-cystathionine[c] '''=>''' 1 H+[c] '''+''' 1 L-cysteine[c] '''+''' 1 (2Z)-2-aminobut-2-enoate[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Ec-12_003100]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
== Pathways ==
 +
* [[HOMOCYSDEGR-PWY]], L-cysteine biosynthesis III (from L-homocysteine): [http://metacyc.org/META/NEW-IMAGE?object=HOMOCYSDEGR-PWY HOMOCYSDEGR-PWY]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-801]], L-homocysteine and L-cysteine interconversion: [http://metacyc.org/META/NEW-IMAGE?object=PWY-801 PWY-801]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[annotation]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
{{#set: left end position=1929867}}
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* RHEA:
{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24913 24913]
{{#set: right end position=1941827}}
+
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: centisome position=28.816605    }}
+
{{#set: common name=Pyridoxal phosphate-dependent transferase, major region, subdomain 1}}
{{#set: common name=Esi_0007_0100|Esi0007_0100|PP}}
+
{{#set: gene associated=Ec-12_003100}}
{{#set: reaction associated=3.1.3.16-RXN}}
+
{{#set: in pathway=HOMOCYSDEGR-PWY|PWY-801}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:44, 21 March 2018

Reaction RXN-14048

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Pyridoxal phosphate-dependent transferase, major region, subdomain 1
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 L-cystathionine[c] => 1 H+[c] + 1 L-cysteine[c] + 1 (2Z)-2-aminobut-2-enoate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • HOMOCYSDEGR-PWY, L-cysteine biosynthesis III (from L-homocysteine): HOMOCYSDEGR-PWY
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-801, L-homocysteine and L-cysteine interconversion: PWY-801
    • 3 reactions found over 4 reactions in the full pathway

Reconstruction information

External links