Difference between revisions of "RXN-5841"
From metabolic_network
(Created page with "Category:Gene == Gene Ec-27_005030 == * left end position: ** 4554906 * transcription direction: ** NEGATIVE * right end position: ** 4563758 * centisome position: ** 70.6...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5841 RXN-5841] == * direction: ** LEFT-TO-RIGHT * common name: ** 5'-nucleotidase * ec number:...") |
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| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5841 RXN-5841] == |
| − | * | + | * direction: |
| − | + | ** LEFT-TO-RIGHT | |
| − | + | * common name: | |
| − | ** | + | ** 5'-nucleotidase |
| − | * | + | * ec number: |
| − | ** | + | ** [http://enzyme.expasy.org/EC/3.1.3.5 EC-3.1.3.5] |
| − | * | + | |
| − | ** | + | |
* Synonym(s): | * Synonym(s): | ||
| − | |||
| − | |||
| − | == | + | == Reaction Formula == |
| − | * [[ | + | * With identifiers: |
| − | * | + | ** 1 [[NICOTINAMIDE_NUCLEOTIDE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[NICOTINAMIDE_RIBOSE]][c] '''+''' 1 [[Pi]][c] |
| − | ** | + | * With common name(s): |
| − | + | ** 1 β-nicotinamide D-ribonucleotide[c] '''+''' 1 H2O[c] '''=>''' 1 1-(β-D ribofuranosyl)nicotinamide[c] '''+''' 1 phosphate[c] | |
| − | + | ||
| − | + | == Genes associated with this reaction == | |
| − | == | + | Genes have been associated with this reaction based on different elements listed below. |
| − | * [[ | + | * Gene: [[Ec-12_005060]] |
| − | * [[ | + | ** Source: [[annotation-esiliculosus_genome]] |
| − | * | + | *** Assignment: GO-TERM |
| − | * [[ | + | * Gene: [[Ec-15_000820]] |
| − | * [[ | + | ** Source: [[annotation-esiliculosus_genome]] |
| − | * | + | *** Assignment: GO-TERM |
| − | * [[ | + | * Gene: [[Ec-05_000950]] |
| − | * [[ | + | ** Source: [[annotation-esiliculosus_genome]] |
| − | * | + | *** Assignment: AUTOMATED-NAME-MATCH |
| − | * [[PWY- | + | == Pathways == |
| − | * [[ | + | * [[PWY-5381]], pyridine nucleotide cycling (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5381 PWY-5381] |
| − | * [[ | + | ** '''5''' reactions found over '''11''' reactions in the full pathway |
| − | * [[ | + | * [[NAD-BIOSYNTHESIS-II]], NAD salvage pathway III: [http://metacyc.org/META/NEW-IMAGE?object=NAD-BIOSYNTHESIS-II NAD-BIOSYNTHESIS-II] |
| − | * [[ | + | ** '''2''' reactions found over '''5''' reactions in the full pathway |
| + | == Reconstruction information == | ||
| + | * Category: [[annotation]] | ||
| + | ** Source: [[annotation-esiliculosus_genome]] | ||
| + | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
| − | {{#set: | + | * RHEA: |
| − | {{#set: | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30815 30815] |
| − | {{#set: | + | * LIGAND-RXN: |
| − | {{#set: | + | ** [http://www.genome.jp/dbget-bin/www_bget?R02323 R02323] |
| − | {{#set: | + | {{#set: direction=LEFT-TO-RIGHT}} |
| − | {{#set: | + | {{#set: common name=5'-nucleotidase}} |
| − | {{#set: | + | {{#set: ec number=EC-3.1.3.5}} |
| + | {{#set: gene associated=Ec-12_005060|Ec-15_000820|Ec-05_000950}} | ||
| + | {{#set: in pathway=PWY-5381|NAD-BIOSYNTHESIS-II}} | ||
| + | {{#set: reconstruction category=annotation}} | ||
| + | {{#set: reconstruction source=annotation-esiliculosus_genome}} | ||
| + | {{#set: reconstruction tool=pathwaytools}} | ||
Latest revision as of 19:44, 21 March 2018
Contents
Reaction RXN-5841
- direction:
- LEFT-TO-RIGHT
- common name:
- 5'-nucleotidase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 NICOTINAMIDE_NUCLEOTIDE[c] + 1 WATER[c] => 1 NICOTINAMIDE_RIBOSE[c] + 1 Pi[c]
- With common name(s):
- 1 β-nicotinamide D-ribonucleotide[c] + 1 H2O[c] => 1 1-(β-D ribofuranosyl)nicotinamide[c] + 1 phosphate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Ec-12_005060
- Source: annotation-esiliculosus_genome
- Assignment: GO-TERM
- Source: annotation-esiliculosus_genome
- Gene: Ec-15_000820
- Source: annotation-esiliculosus_genome
- Assignment: GO-TERM
- Source: annotation-esiliculosus_genome
- Gene: Ec-05_000950
- Source: annotation-esiliculosus_genome
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-esiliculosus_genome
Pathways
- PWY-5381, pyridine nucleotide cycling (plants): PWY-5381
- 5 reactions found over 11 reactions in the full pathway
- NAD-BIOSYNTHESIS-II, NAD salvage pathway III: NAD-BIOSYNTHESIS-II
- 2 reactions found over 5 reactions in the full pathway
Reconstruction information
- Category: annotation
- Source: annotation-esiliculosus_genome
- Tool: pathwaytools
- Source: annotation-esiliculosus_genome
External links
