Difference between revisions of "Ec-24 002640"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=NAD-SYNTH-NH3-RXN NAD-SYNTH-NH3-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzym...")
(Created page with "Category:Gene == Gene Ec-24_002640 == * left end position: ** 2934098 * transcription direction: ** NEGATIVE * right end position: ** 2941168 * centisome position: ** 58.8...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=NAD-SYNTH-NH3-RXN NAD-SYNTH-NH3-RXN] ==
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== Gene Ec-24_002640 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 2934098
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/6.3.1.5 EC-6.3.1.5]
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** NEGATIVE
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* right end position:
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** 2941168
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* centisome position:
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** 58.827007   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0340_0018
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** Esi0340_0018
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** SHMT2
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[GLYOHMETRANS-RXN]]
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** 1 [[ATP]][c] '''+''' 1 [[AMMONIUM]][c] '''+''' 1 [[DEAMIDO-NAD]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[NAD]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 ATP[c] '''+''' 1 ammonium[c] '''+''' 1 nicotinate adenine dinucleotide[c] '''=>''' 1 diphosphate[c] '''+''' 1 H+[c] '''+''' 1 AMP[c] '''+''' 1 NAD+[c]
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* Reaction: [[RXN0-5234]]
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== Genes associated with this reaction  ==
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== Pathways  ==
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* [[PYRIDNUCSYN-PWY]], NAD biosynthesis I (from aspartate): [http://metacyc.org/META/NEW-IMAGE?object=PYRIDNUCSYN-PWY PYRIDNUCSYN-PWY]
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** '''6''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: automated-name-match
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== Pathways associated ==
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* [[PWY-2161]]
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* [[PWY-1622]]
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* [[PWY-3841]]
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* [[1CMET2-PWY]]
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* [[PWY-3661]]
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* [[GLYSYN-PWY]]
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* [[PWY-5497]]
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* [[PWY-2201]]
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* [[PWY-181]]
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* [[PWY-3661-1]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=2934098}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21188 21188]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=2941168}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00189 R00189]
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{{#set: centisome position=58.827007    }}
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* UNIPROT:
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{{#set: common name=Esi_0340_0018|Esi0340_0018|SHMT2}}
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** [http://www.uniprot.org/uniprot/P08164 P08164]
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{{#set: reaction associated=GLYOHMETRANS-RXN|RXN0-5234}}
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** [http://www.uniprot.org/uniprot/P18843 P18843]
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{{#set: pathway associated=PWY-2161|PWY-1622|PWY-3841|1CMET2-PWY|PWY-3661|GLYSYN-PWY|PWY-5497|PWY-2201|PWY-181|PWY-3661-1}}
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** [http://www.uniprot.org/uniprot/Q03638 Q03638]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: ec number=EC-6.3.1.5}}
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{{#set: in pathway=PYRIDNUCSYN-PWY}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 20:44, 21 March 2018

Gene Ec-24_002640

  • left end position:
    • 2934098
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 2941168
  • centisome position:
    • 58.827007
  • Synonym(s):
    • Esi_0340_0018
    • Esi0340_0018
    • SHMT2

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-24_002640&oldid=29073"