Difference between revisions of "RXN-16401"

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(Created page with "Category:Gene == Gene Ec-03_000570 == * left end position: ** 699613 * transcription direction: ** NEGATIVE * right end position: ** 700287 * centisome position: ** 10.716...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16401 RXN-16401] == * direction: ** LEFT-TO-RIGHT * common name: ** long chain acyl-coA synthet...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Ec-03_000570 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16401 RXN-16401] ==
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* left end position:
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* direction:
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** 699613
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** NEGATIVE
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** long chain acyl-coA synthetase
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* right end position:
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** long chain acyl-CoA synthetase
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** 700287
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/6.2.1.3 EC-6.2.1.3]
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** 10.716025   
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* Synonym(s):
 
* Synonym(s):
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** Esi_0027_0088
 
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** Esi0027_0088
 
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** HMGR1 C-terminus
 
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[1.1.1.34-RXN]]
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* With identifiers:
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** esiliculosus_genome
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** 1 [[ATP]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[CPD-17640]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[CPD-17641]][c] '''+''' 1 [[AMP]][c]
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***ec-number
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* With common name(s):
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** [[pantograph]]-[[aragem]]
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** 1 ATP[c] '''+''' 1 coenzyme A[c] '''+''' 1 18-hydroxystearate[c] '''=>''' 1 diphosphate[c] '''+''' 1 18-hydroxystearoyl-CoA[c] '''+''' 1 AMP[c]
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== Pathways associated ==
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* [[PWY-922]]
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== Genes associated with this reaction  ==
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* [[PWY-6174]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[PWY-7391]]
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* Gene: [[Ec-02_006430]]
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* [[PWY-7524]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-01_001560]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-12_008720]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-03_003710]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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== Pathways ==
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* [[PWY-6733]], sporopollenin precursors biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6733 PWY-6733]
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** '''4''' reactions found over '''18''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=699613}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: common name=long chain acyl-coA synthetase}}
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{{#set: right end position=700287}}
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{{#set: common name=long chain acyl-CoA synthetase}}
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{{#set: centisome position=10.716025    }}
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{{#set: ec number=EC-6.2.1.3}}
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{{#set: common name=Esi_0027_0088|Esi0027_0088|HMGR1 C-terminus}}
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{{#set: gene associated=Ec-02_006430|Ec-01_001560|Ec-12_008720|Ec-03_003710}}
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{{#set: reaction associated=1.1.1.34-RXN}}
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{{#set: in pathway=PWY-6733}}
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{{#set: pathway associated=PWY-922|PWY-6174|PWY-7391|PWY-7524}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 19:45, 21 March 2018

Reaction RXN-16401

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • long chain acyl-coA synthetase
    • long chain acyl-CoA synthetase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 coenzyme A[c] + 1 18-hydroxystearate[c] => 1 diphosphate[c] + 1 18-hydroxystearoyl-CoA[c] + 1 AMP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6733, sporopollenin precursors biosynthesis: PWY-6733
    • 4 reactions found over 18 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-16401&oldid=29105"