Difference between revisions of "RXN-16401"

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(Created page with "Category:Gene == Gene Ec-03_000570 == * left end position: ** 699613 * transcription direction: ** NEGATIVE * right end position: ** 700287 * centisome position: ** 10.716...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16401 RXN-16401] == * direction: ** LEFT-TO-RIGHT * common name: ** long chain acyl-coA synthet...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
== Gene Ec-03_000570 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16401 RXN-16401] ==
* left end position:
+
* direction:
** 699613
+
** LEFT-TO-RIGHT
* transcription direction:
+
* common name:
** NEGATIVE
+
** long chain acyl-coA synthetase
* right end position:
+
** long chain acyl-CoA synthetase
** 700287
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* ec number:
* centisome position:
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** [http://enzyme.expasy.org/EC/6.2.1.3 EC-6.2.1.3]
** 10.716025   
+
 
* Synonym(s):
 
* Synonym(s):
** Esi_0027_0088
 
** Esi0027_0088
 
** HMGR1 C-terminus
 
  
== Reactions associated ==
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== Reaction Formula ==
* [[1.1.1.34-RXN]]
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* With identifiers:
** esiliculosus_genome
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** 1 [[ATP]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[CPD-17640]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[CPD-17641]][c] '''+''' 1 [[AMP]][c]
***ec-number
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* With common name(s):
** [[pantograph]]-[[aragem]]
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** 1 ATP[c] '''+''' 1 coenzyme A[c] '''+''' 1 18-hydroxystearate[c] '''=>''' 1 diphosphate[c] '''+''' 1 18-hydroxystearoyl-CoA[c] '''+''' 1 AMP[c]
== Pathways associated ==
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* [[PWY-922]]
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== Genes associated with this reaction  ==
* [[PWY-6174]]
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Genes have been associated with this reaction based on different elements listed below.
* [[PWY-7391]]
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* Gene: [[Ec-02_006430]]
* [[PWY-7524]]
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** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-01_001560]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-12_008720]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-03_003710]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
== Pathways ==
 +
* [[PWY-6733]], sporopollenin precursors biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6733 PWY-6733]
 +
** '''4''' reactions found over '''18''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[annotation]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
{{#set: left end position=699613}}
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{{#set: direction=LEFT-TO-RIGHT}}
{{#set: transcription direction=NEGATIVE}}
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{{#set: common name=long chain acyl-coA synthetase}}
{{#set: right end position=700287}}
+
{{#set: common name=long chain acyl-CoA synthetase}}
{{#set: centisome position=10.716025    }}
+
{{#set: ec number=EC-6.2.1.3}}
{{#set: common name=Esi_0027_0088|Esi0027_0088|HMGR1 C-terminus}}
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{{#set: gene associated=Ec-02_006430|Ec-01_001560|Ec-12_008720|Ec-03_003710}}
{{#set: reaction associated=1.1.1.34-RXN}}
+
{{#set: in pathway=PWY-6733}}
{{#set: pathway associated=PWY-922|PWY-6174|PWY-7391|PWY-7524}}
+
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:45, 21 March 2018

Reaction RXN-16401

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • long chain acyl-coA synthetase
    • long chain acyl-CoA synthetase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 coenzyme A[c] + 1 18-hydroxystearate[c] => 1 diphosphate[c] + 1 18-hydroxystearoyl-CoA[c] + 1 AMP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6733, sporopollenin precursors biosynthesis: PWY-6733
    • 4 reactions found over 18 reactions in the full pathway

Reconstruction information

External links