Difference between revisions of "RXN-600"

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(Created page with "Category:Gene == Gene Ec-07_003070 == * left end position: ** 3260412 * transcription direction: ** NEGATIVE * right end position: ** 3263562 * centisome position: ** 42.2...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-600 RXN-600] == * direction: ** LEFT-TO-RIGHT * common name: ** NAD(P)-binding domain * ec numb...")
 
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Ec-07_003070 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-600 RXN-600] ==
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* left end position:
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* direction:
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** 3260412
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** NEGATIVE
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** NAD(P)-binding domain
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* right end position:
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* ec number:
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** 3263562
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** [http://enzyme.expasy.org/EC/1.1.1.219 EC-1.1.1.219]
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* centisome position:
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** 42.220028   
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* Synonym(s):
 
* Synonym(s):
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** Esi_0327_0019
 
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** Esi0327_0019
 
  
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== Reactions associated ==
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== Reaction Formula ==
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* Reaction: [[ATPASE-RXN]]
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* With identifiers:
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** 1 [[CPD-474]][c] '''+''' 1 [[NADPH]][c] '''+''' 2 [[PROTON]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[CPD-590]][c]
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* With common name(s):
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** 1 (+)-taxifolin[c] '''+''' 1 NADPH[c] '''+''' 2 H+[c] '''=>''' 1 NADP+[c] '''+''' 1 (2R,3S,4S)-leucocyanidin[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-12_005240]]
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** Source: [[orthology-aragem]]
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* Gene: [[Ec-23_001220]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-aragem]]
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* Gene: [[Ec-12_001350]]
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** Source: [[orthology-aragem]]
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== Pathways  ==
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* [[PWY1F-823]], leucopelargonidin and leucocyanidin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY1F-823 PWY1F-823]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
 
** Source: [[orthology-aragem]]
 
** Source: [[orthology-aragem]]
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* Reaction: [[ATPSYN-RXN]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: go-term
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*** Tool: [[pathwaytools]]
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== Pathways associated ==
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* [[PWY-7219]]
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== External links  ==
 
== External links  ==
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{{#set: left end position=3260412}}
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* LIGAND-RXN:
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{{#set: transcription direction=NEGATIVE}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03636 R03636]
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{{#set: right end position=3263562}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: centisome position=42.220028    }}
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{{#set: common name=NAD(P)-binding domain}}
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{{#set: common name=Esi_0327_0019|Esi0327_0019}}
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{{#set: ec number=EC-1.1.1.219}}
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{{#set: reaction associated=ATPASE-RXN|ATPSYN-RXN}}
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{{#set: gene associated=Ec-12_005240|Ec-23_001220|Ec-12_001350}}
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{{#set: pathway associated=PWY-7219}}
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{{#set: in pathway=PWY1F-823}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:46, 21 March 2018

Reaction RXN-600

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • NAD(P)-binding domain
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 (+)-taxifolin[c] + 1 NADPH[c] + 2 H+[c] => 1 NADP+[c] + 1 (2R,3S,4S)-leucocyanidin[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY1F-823, leucopelargonidin and leucocyanidin biosynthesis: PWY1F-823
    • 3 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-600&oldid=29211"