Difference between revisions of "DIPHOSPHOMEVALONTE-DECARBOXYLASE-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10862 RXN-10862] == * direction: ** REVERSIBLE * common name: ** Apyrase * ec number: ** [http:...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIPHOSPHOMEVALONTE-DECARBOXYLASE-RXN DIPHOSPHOMEVALONTE-DECARBOXYLASE-RXN] == * direction: ** LEFT-...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10862 RXN-10862] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIPHOSPHOMEVALONTE-DECARBOXYLASE-RXN DIPHOSPHOMEVALONTE-DECARBOXYLASE-RXN] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Apyrase
+
** GHMP kinase, C-terminal domain
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.6.1.5 EC-3.6.1.5]
+
** [http://enzyme.expasy.org/EC/4.1.1.33 EC-4.1.1.33]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[ADP]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[Pi]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[PROTON]][c]
+
** 1 [[ATP]][c] '''+''' 1 [[CPD-641]][c] '''=>''' 1 [[DELTA3-ISOPENTENYL-PP]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[ADP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 ADP[c] '''+''' 1 H2O[c] '''<=>''' 1 phosphate[c] '''+''' 1 AMP[c] '''+''' 1 H+[c]
+
** 1 ATP[c] '''+''' 1 (R)-mevalonate diphosphate[c] '''=>''' 1 isopentenyl diphosphate[c] '''+''' 1 CO2[c] '''+''' 1 phosphate[c] '''+''' 1 ADP[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-02_001970]]
+
* Gene: [[Ec-21_001440]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***AUTOMATED-NAME-MATCH
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*** Assignment: EC-NUMBER
−
* [[Ec-10_003360]]
+
** Source: [[orthology-aragem]]
−
** [[pantograph]]-[[aragem]]
+
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-922]], mevalonate pathway I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-922 PWY-922]
 +
** '''7''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7391]], isoprene biosynthesis II (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7391 PWY-7391]
 +
** '''7''' reactions found over '''8''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-aragem]]
−
*** [[aragem]]
+
*** Tool: [[pantograph]]
−
* [[annotation]]:
+
* Category: [[annotation]]
−
** [[pathwaytools]]:
+
** Source: [[annotation-esiliculosus_genome]]
−
*** [[esiliculosus_genome]]
+
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23732 23732]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00122 R00122]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01121 R01121]
−
{{#set: direction=REVERSIBLE}}
+
* UNIPROT:
−
{{#set: common name=Apyrase}}
+
** [http://www.uniprot.org/uniprot/P32377 P32377]
−
{{#set: ec number=EC-3.6.1.5}}
+
** [http://www.uniprot.org/uniprot/Q9U2A1 Q9U2A1]
−
{{#set: gene associated=Ec-02_001970|Ec-10_003360}}
+
** [http://www.uniprot.org/uniprot/Q9U294 Q9U294]
−
{{#set: in pathway=}}
+
** [http://www.uniprot.org/uniprot/O13963 O13963]
−
{{#set: reconstruction category=orthology}}
+
** [http://www.uniprot.org/uniprot/Q9M381 Q9M381]
−
{{#set: reconstruction tool=pantograph}}
+
** [http://www.uniprot.org/uniprot/O23722 O23722]
−
{{#set: reconstruction source=aragem}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: common name=GHMP kinase, C-terminal domain}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: ec number=EC-4.1.1.33}}
−
{{#set: reconstruction source=esiliculosus_genome}}
+
{{#set: gene associated=Ec-21_001440}}
 +
{{#set: in pathway=PWY-922|PWY-7391}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 19:47, 21 March 2018

Reaction DIPHOSPHOMEVALONTE-DECARBOXYLASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • GHMP kinase, C-terminal domain
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 (R)-mevalonate diphosphate[c] => 1 isopentenyl diphosphate[c] + 1 CO2[c] + 1 phosphate[c] + 1 ADP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-922, mevalonate pathway I: PWY-922
    • 7 reactions found over 7 reactions in the full pathway
  • PWY-7391, isoprene biosynthesis II (engineered): PWY-7391
    • 7 reactions found over 8 reactions in the full pathway

Reconstruction information

External links





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