Difference between revisions of "Ec-12 008040"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-281 RXN66-281] == * direction: ** LEFT-TO-RIGHT * common name: ** squalene synthase ** Isopen...")
(Created page with "Category:Gene == Gene Ec-12_008040 == * left end position: ** 7119835 * transcription direction: ** NEGATIVE * right end position: ** 7129266 * centisome position: ** 85.4...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-281 RXN66-281] ==
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== Gene Ec-12_008040 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 7119835
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* common name:
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* transcription direction:
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** squalene synthase
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** NEGATIVE
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** Isopentenyl-diphosphate delta-isomerase type 1 fused to squalene synthase; probably two separate ORFs
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* right end position:
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** 7129266
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* centisome position:
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** 85.41016   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0520_0002
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** Esi0520_0002
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** GDH2
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[GLUTAMATE-DEHYDROGENASE-RXN]]
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** 1 [[PROTON]][c] '''+''' 1 [[NADH-P-OR-NOP]][c] '''+''' 1 [[CPD-465]][c] '''=>''' 1 [[SQUALENE]][c] '''+''' 1 [[NAD-P-OR-NOP]][c] '''+''' 1 [[PPI]][c]
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** Source: [[orthology-aragem]]
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* With common name(s):
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* Reaction: [[GLUTDEHYD-RXN]]
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** 1 H+[c] '''+''' 1 NAD(P)H[c] '''+''' 1 presqualene diphosphate[c] '''=>''' 1 squalene[c] '''+''' 1 NAD(P)+[c] '''+''' 1 diphosphate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-11_001030]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[GLUTAMATE-DEG1-PWY]]
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* [[PWY-5913]]
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* [[ALACAT2-PWY]]
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* [[P162-PWY]]
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* [[PWY-5022]]
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* [[PWY-5675]]
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* [[PWY-6728]]
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* [[PWY-7126]]
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* [[GLUTSYNIII-PWY]]
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* [[PWY490-3]]
 
== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: left end position=7119835}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02872 R02872]
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{{#set: transcription direction=NEGATIVE}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=7129266}}
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{{#set: common name=squalene synthase}}
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{{#set: centisome position=85.41016    }}
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{{#set: common name=Isopentenyl-diphosphate delta-isomerase type 1 fused to squalene synthase; probably two separate ORFs}}
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{{#set: common name=Esi_0520_0002|Esi0520_0002|GDH2}}
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{{#set: gene associated=Ec-11_001030}}
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{{#set: reaction associated=GLUTAMATE-DEHYDROGENASE-RXN|GLUTDEHYD-RXN}}
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{{#set: in pathway=}}
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{{#set: pathway associated=GLUTAMATE-DEG1-PWY|PWY-5913|ALACAT2-PWY|P162-PWY|PWY-5022|PWY-5675|PWY-6728|PWY-7126|GLUTSYNIII-PWY|PWY490-3}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 19:47, 21 March 2018

Gene Ec-12_008040

  • left end position:
    • 7119835
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 7129266
  • centisome position:
    • 85.41016
  • Synonym(s):
    • Esi_0520_0002
    • Esi0520_0002
    • GDH2

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-12_008040&oldid=29291"