Difference between revisions of "RXN-3521"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13444 RXN-13444] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-3521 RXN-3521] == * direction: ** LEFT-TO-RIGHT * common name: ** Haem peroxidase, plant/fungal...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13444 RXN-13444] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-3521 RXN-3521] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* ec number:
+
* common name:
−
** [http://enzyme.expasy.org/EC/4.2.1.134 EC-4.2.1.134]
+
** Haem peroxidase, plant/fungal/bacterial
 +
** ascorbate peroxidase
 
* Synonym(s):
 
* Synonym(s):
 +
** L-ascorbic acid peroxidase
 +
** L-ascorbic acid-specific peroxidase
 +
** ascorbic acid peroxidase
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CPD-14424]][c] '''=>''' 1 [[CPD-14425]][c] '''+''' 1 [[WATER]][c]
+
** 2 [[ASCORBATE]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 2 [[PROTON]][c] '''=>''' 2 [[CPD-318]][c] '''+''' 2 [[WATER]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 (5Z,8Z,11Z,14Z,17Z)-3R-hydroxy-docosapentaenoyl-CoA[c] '''=>''' 1 (2E,7Z,10Z,13Z,16Z,19Z)-docosahexaenoyl-CoA[c] '''+''' 1 H2O[c]
+
** 2 L-ascorbate[c] '''+''' 1 hydrogen peroxide[c] '''+''' 2 H+[c] '''=>''' 2 monodehydroascorbate radical[c] '''+''' 2 H2O[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Ec-19_000230]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-02_001740]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-02_001210]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7053]], docosahexaenoate biosynthesis I (lower eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7053 PWY-7053]
+
* [[PWY-2261]], ascorbate glutathione cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2261 PWY-2261]
−
** '''5''' reactions found over '''7''' reactions in the full pathway
+
** '''3''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-7606]], docosahexaenoate biosynthesis III (6-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7606 PWY-7606]
+
−
** '''14''' reactions found over '''14''' reactions in the full pathway
+
−
* [[PWY-7727]], docosahexaenoate biosynthesis IV (4-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7727 PWY-7727]
+
−
** '''5''' reactions found over '''6''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
Line 26: Line 36:
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30266 30266]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R09540 R09540]
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00644 R00644]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P48534 P48534]
 +
** [http://www.uniprot.org/uniprot/Q7M287 Q7M287]
 +
** [http://www.uniprot.org/uniprot/O49159 O49159]
 +
** [http://www.uniprot.org/uniprot/Q7M3G0 Q7M3G0]
 +
** [http://www.uniprot.org/uniprot/Q05431 Q05431]
 +
** [http://www.uniprot.org/uniprot/Q43824 Q43824]
 +
** [http://www.uniprot.org/uniprot/Q41772 Q41772]
 +
** [http://www.uniprot.org/uniprot/Q41371 Q41371]
 +
** [http://www.uniprot.org/uniprot/Q42661 Q42661]
 +
** [http://www.uniprot.org/uniprot/Q42564 Q42564]
 +
** [http://www.uniprot.org/uniprot/O46921 O46921]
 +
** [http://www.uniprot.org/uniprot/P93404 P93404]
 +
** [http://www.uniprot.org/uniprot/Q9FE01 Q9FE01]
 +
** [http://www.uniprot.org/uniprot/O65634 O65634]
 +
** [http://www.uniprot.org/uniprot/Q39843 Q39843]
 +
** [http://www.uniprot.org/uniprot/O49122 O49122]
 +
** [http://www.uniprot.org/uniprot/O49822 O49822]
 +
** [http://www.uniprot.org/uniprot/Q42459 Q42459]
 +
** [http://www.uniprot.org/uniprot/Q39780 Q39780]
 +
** [http://www.uniprot.org/uniprot/Q96399 Q96399]
 +
** [http://www.uniprot.org/uniprot/O81333 O81333]
 +
** [http://www.uniprot.org/uniprot/O81603 O81603]
 +
** [http://www.uniprot.org/uniprot/O81604 O81604]
 +
** [http://www.uniprot.org/uniprot/Q42909 Q42909]
 +
** [http://www.uniprot.org/uniprot/Q9STM9 Q9STM9]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-4.2.1.134}}
+
{{#set: common name=Haem peroxidase, plant/fungal/bacterial}}
−
{{#set: in pathway=PWY-7053|PWY-7606|PWY-7727}}
+
{{#set: common name=ascorbate peroxidase}}
 +
{{#set: common name=L-ascorbic acid peroxidase|L-ascorbic acid-specific peroxidase|ascorbic acid peroxidase}}
 +
{{#set: gene associated=Ec-19_000230|Ec-02_001740|Ec-02_001210}}
 +
{{#set: in pathway=PWY-2261}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:47, 21 March 2018

Reaction RXN-3521

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Haem peroxidase, plant/fungal/bacterial
    • ascorbate peroxidase
  • Synonym(s):
    • L-ascorbic acid peroxidase
    • L-ascorbic acid-specific peroxidase
    • ascorbic acid peroxidase

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 2 L-ascorbate[c] + 1 hydrogen peroxide[c] + 2 H+[c] => 2 monodehydroascorbate radical[c] + 2 H2O[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-2261, ascorbate glutathione cycle: PWY-2261
    • 3 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





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