Difference between revisions of "RXN-9896"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=OROPRIBTRANS-RXN OROPRIBTRANS-RXN] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.exp...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9896 RXN-9896] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * With id...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=OROPRIBTRANS-RXN OROPRIBTRANS-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9896 RXN-9896] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/2.4.2.10 EC-2.4.2.10]
+
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[PPI]][c] '''+''' 1 [[OROTIDINE-5-PHOSPHATE]][c] '''<=>''' 1 [[PRPP]][c] '''+''' 1 [[OROTATE]][c]
+
** 1 [[3-HYDROXY-N6N6N6-TRIMETHYL-L-LYSINE]][c] '''=>''' 1 [[GLY]][c] '''+''' 1 [[4-TRIMETHYLAMMONIOBUTANAL]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 diphosphate[c] '''+''' 1 orotidine 5'-phosphate[c] '''<=>''' 1 5-phospho-&alpha;-D-ribose 1-diphosphate[c] '''+''' 1 orotate[c]
+
** 1 3-hydroxy-N6,N6,N6-trimethyl-L-lysine[c] '''=>''' 1 glycine[c] '''+''' 1 4-trimethylammoniobutanal[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Ec-23_000110]]
+
* Gene: [[Ec-11_002460]]
 
** Source: [[orthology-aragem]]
 
** Source: [[orthology-aragem]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5686]], UMP biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5686 PWY-5686]
+
* [[PWY-6100]], L-carnitine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6100 PWY-6100]
−
** '''6''' reactions found over '''6''' reactions in the full pathway
+
** '''1''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
 
** Source: [[orthology-aragem]]
 
** Source: [[orthology-aragem]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
−
* Category: [[annotation]]
 
−
** Source: [[annotation-esiliculosus_genome]]
 
−
*** Tool: [[pathwaytools]]
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10380 10380]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01870 R01870]
+
** [http://www.genome.jp/dbget-bin/www_bget?R03284 R03284]
−
* UNIPROT:
+
{{#set: direction=LEFT-TO-RIGHT}}
−
** [http://www.uniprot.org/uniprot/P08309 P08309]
+
{{#set: gene associated=Ec-11_002460}}
−
** [http://www.uniprot.org/uniprot/P11172 P11172]
+
{{#set: in pathway=PWY-6100}}
−
** [http://www.uniprot.org/uniprot/P18132 P18132]
+
{{#set: reconstruction category=orthology}}
−
** [http://www.uniprot.org/uniprot/P77889 P77889]
+
{{#set: reconstruction source=orthology-aragem}}
−
** [http://www.uniprot.org/uniprot/P0A5U0 P0A5U0]
+
{{#set: reconstruction tool=pantograph}}
−
** [http://www.uniprot.org/uniprot/Q9PIR1 Q9PIR1]
+
−
** [http://www.uniprot.org/uniprot/O67742 O67742]
+
−
** [http://www.uniprot.org/uniprot/O58855 O58855]
+
−
** [http://www.uniprot.org/uniprot/Q9Z7U6 Q9Z7U6]
+
−
** [http://www.uniprot.org/uniprot/Q9Y9D8 Q9Y9D8]
+
−
** [http://www.uniprot.org/uniprot/P56814 P56814]
+
−
** [http://www.uniprot.org/uniprot/Q58509 Q58509]
+
−
** [http://www.uniprot.org/uniprot/O28533 O28533]
+
−
** [http://www.uniprot.org/uniprot/Q9CGM8 Q9CGM8]
+
−
** [http://www.uniprot.org/uniprot/P25972 P25972]
+
−
** [http://www.uniprot.org/uniprot/O27888 O27888]
+
−
** [http://www.uniprot.org/uniprot/P65915 P65915]
+
−
** [http://www.uniprot.org/uniprot/P46534 P46534]
+
−
** [http://www.uniprot.org/uniprot/P43855 P43855]
+
−
** [http://www.uniprot.org/uniprot/P31754 P31754]
+
−
** [http://www.uniprot.org/uniprot/P18904 P18904]
+
−
** [http://www.uniprot.org/uniprot/Q01637 Q01637]
+
−
** [http://www.uniprot.org/uniprot/P09556 P09556]
+
−
** [http://www.uniprot.org/uniprot/P21846 P21846]
+
−
** [http://www.uniprot.org/uniprot/P35788 P35788]
+
−
** [http://www.uniprot.org/uniprot/P08870 P08870]
+
−
** [http://www.uniprot.org/uniprot/Q18516 Q18516]
+
−
** [http://www.uniprot.org/uniprot/Q45918 Q45918]
+
−
** [http://www.uniprot.org/uniprot/Q42586 Q42586]
+
−
** [http://www.uniprot.org/uniprot/P41923 P41923]
+
−
** [http://www.uniprot.org/uniprot/Q55574 Q55574]
+
−
** [http://www.uniprot.org/uniprot/Q42942 Q42942]
+
−
** [http://www.uniprot.org/uniprot/O76139 O76139]
+
−
** [http://www.uniprot.org/uniprot/O61790 O61790]
+
−
** [http://www.uniprot.org/uniprot/Q9X8R7 Q9X8R7]
+
−
** [http://www.uniprot.org/uniprot/O94331 O94331]
+
−
** [http://www.uniprot.org/uniprot/P30402 P30402]
+
−
** [http://www.uniprot.org/uniprot/P13298 P13298]
+
−
** [http://www.uniprot.org/uniprot/P0A7E3 P0A7E3]
+
−
{{#set: direction=REVERSIBLE}}
+
−
{{#set: ec number=EC-2.4.2.10}}
+
−
{{#set: gene associated=Ec-23_000110}}
+
−
{{#set: in pathway=PWY-5686}}
+
−
{{#set: reconstruction category=orthology|annotation}}
+
−
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
+
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Latest revision as of 20:47, 21 March 2018

Reaction RXN-9896

  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6100, L-carnitine biosynthesis: PWY-6100
    • 1 reactions found over 4 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-9896&oldid=29362"