Difference between revisions of "Ec-03 000060"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=VALINE--TRNA-LIGASE-RXN VALINE--TRNA-LIGASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name: **...")
 
(Created page with "Category:Gene == Gene Ec-03_000060 == * left end position: ** 114476 * transcription direction: ** NEGATIVE * right end position: ** 121338 * centisome position: ** 1.7534...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=VALINE--TRNA-LIGASE-RXN VALINE--TRNA-LIGASE-RXN] ==
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== Gene Ec-03_000060 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 114476
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* common name:
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* transcription direction:
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** Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding
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** NEGATIVE
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** Valine--tRNA ligase
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* right end position:
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* ec number:
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** 121338
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** [http://enzyme.expasy.org/EC/6.1.1.9 EC-6.1.1.9]
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* centisome position:
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** 1.7534378   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0523_0003
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** Esi0523_0003
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[PROTEIN-KINASE-RXN]]
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** 1 [[VAL-tRNAs]][c] '''+''' 1 [[VAL]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[Charged-VAL-tRNAs]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: go-term
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** 1 a tRNAval[c] '''+''' 1 L-valine[c] '''+''' 1 ATP[c] '''+''' 1 H+[c] '''=>''' 1 AMP[c] '''+''' 1 diphosphate[c] '''+''' 1 an L-valyl-[tRNAval][c]
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== Pathways associated ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-12_005070]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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* [[Ec-08_004480]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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== Pathways ==
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* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
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** '''21''' reactions found over '''21''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[esiliculosus_genome]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=114476}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10704 10704]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=121338}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03665 R03665]
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{{#set: centisome position=1.7534378    }}
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* UNIPROT:
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{{#set: common name=Esi_0523_0003|Esi0523_0003}}
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** [http://www.uniprot.org/uniprot/P28350 P28350]
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{{#set: reaction associated=PROTEIN-KINASE-RXN}}
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** [http://www.uniprot.org/uniprot/P36420 P36420]
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** [http://www.uniprot.org/uniprot/P56000 P56000]
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** [http://www.uniprot.org/uniprot/O51680 O51680]
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** [http://www.uniprot.org/uniprot/O67411 O67411]
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** [http://www.uniprot.org/uniprot/O83998 O83998]
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** [http://www.uniprot.org/uniprot/Q9ZCN6 Q9ZCN6]
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** [http://www.uniprot.org/uniprot/Q9Z987 Q9Z987]
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** [http://www.uniprot.org/uniprot/Q9X2D7 Q9X2D7]
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** [http://www.uniprot.org/uniprot/Q9ZK61 Q9ZK61]
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** [http://www.uniprot.org/uniprot/Q9CDP6 Q9CDP6]
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** [http://www.uniprot.org/uniprot/Q58413 Q58413]
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** [http://www.uniprot.org/uniprot/P43834 P43834]
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** [http://www.uniprot.org/uniprot/Q9PPE4 Q9PPE4]
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** [http://www.uniprot.org/uniprot/O84304 O84304]
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** [http://www.uniprot.org/uniprot/P47576 P47576]
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** [http://www.uniprot.org/uniprot/Q94678 Q94678]
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** [http://www.uniprot.org/uniprot/Q04462 Q04462]
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** [http://www.uniprot.org/uniprot/P26640 P26640]
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** [http://www.uniprot.org/uniprot/Q05873 Q05873]
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** [http://www.uniprot.org/uniprot/Q26177 Q26177]
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** [http://www.uniprot.org/uniprot/P75304 P75304]
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** [http://www.uniprot.org/uniprot/Q49021 Q49021]
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** [http://www.uniprot.org/uniprot/P11931 P11931]
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** [http://www.uniprot.org/uniprot/P07806 P07806]
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** [http://www.uniprot.org/uniprot/P07118 P07118]
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** [http://www.uniprot.org/uniprot/O77443 O77443]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding}}
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{{#set: common name=Valine--tRNA ligase}}
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{{#set: ec number=EC-6.1.1.9}}
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{{#set: gene associated=Ec-12_005070|Ec-08_004480}}
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{{#set: in pathway=TRNA-CHARGING-PWY}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=esiliculosus_genome}}
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Latest revision as of 20:47, 21 March 2018

Gene Ec-03_000060

  • left end position:
    • 114476
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 121338
  • centisome position:
    • 1.7534378
  • Synonym(s):
    • Esi_0523_0003
    • Esi0523_0003

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-03_000060&oldid=29363"