Difference between revisions of "Ec-25 001900"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PSERTRANSAM-RXN PSERTRANSAM-RXN] == * direction: ** REVERSIBLE * common name: ** Phosphoglycerate d...")
(Created page with "Category:Gene == Gene Ec-25_001900 == * left end position: ** 2209704 * transcription direction: ** NEGATIVE * right end position: ** 2224657 * centisome position: ** 49.6...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PSERTRANSAM-RXN PSERTRANSAM-RXN] ==
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== Gene Ec-25_001900 ==
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* direction:
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* left end position:
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** REVERSIBLE
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** 2209704
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* common name:
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* transcription direction:
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** Phosphoglycerate dehydrogenase / Phosphoserine aminotransferase
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** NEGATIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/2.6.1.52 EC-2.6.1.52]
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** 2224657
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* centisome position:
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** 49.645805   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0116_0039
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** Esi0116_0039
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[FORMATETHFLIG-RXN]]
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** 1 [[3-P-SERINE]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''<=>''' 1 [[3-P-HYDROXYPYRUVATE]][c] '''+''' 1 [[GLT]][c]
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* With common name(s):
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** 1 3-phospho-L-serine[c] '''+''' 1 2-oxoglutarate[c] '''<=>''' 1 3-phospho-hydroxypyruvate[c] '''+''' 1 L-glutamate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-17_000820]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[SERSYN-PWY]], L-serine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=SERSYN-PWY SERSYN-PWY]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: go-term
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== Pathways associated ==
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* [[PWY-2201]]
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* [[PWY-1722]]
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* [[PWY-2161]]
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* [[CODH-PWY]]
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* [[PWY-3841]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=2209704}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14329 14329]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=2224657}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04173 R04173]
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{{#set: centisome position=49.645805    }}
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* UNIPROT:
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{{#set: common name=Esi_0116_0039|Esi0116_0039}}
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** [http://www.uniprot.org/uniprot/P10658 P10658]
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{{#set: reaction associated=FORMATETHFLIG-RXN}}
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** [http://www.uniprot.org/uniprot/P23721 P23721]
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{{#set: pathway associated=PWY-2201|PWY-1722|PWY-2161|CODH-PWY|PWY-3841}}
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** [http://www.uniprot.org/uniprot/Q9PIH3 Q9PIH3]
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** [http://www.uniprot.org/uniprot/Q9CHW5 Q9CHW5]
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** [http://www.uniprot.org/uniprot/P44336 P44336]
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** [http://www.uniprot.org/uniprot/O34370 O34370]
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** [http://www.uniprot.org/uniprot/P62676 P62676]
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** [http://www.uniprot.org/uniprot/P33330 P33330]
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** [http://www.uniprot.org/uniprot/P19689 P19689]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=Phosphoglycerate dehydrogenase / Phosphoserine aminotransferase}}
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{{#set: ec number=EC-2.6.1.52}}
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{{#set: gene associated=Ec-17_000820}}
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{{#set: in pathway=SERSYN-PWY}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 19:47, 21 March 2018

Gene Ec-25_001900

  • left end position:
    • 2209704
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 2224657
  • centisome position:
    • 49.645805
  • Synonym(s):
    • Esi_0116_0039
    • Esi0116_0039

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-25_001900&oldid=29366"