Difference between revisions of "GDP-MANNOSE-6-DEHYDROGENASE-RXN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-14426 CPD-14426] == * smiles: ** CCC=CCC=CCC=CCC=CCC=CCCCCCC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GDP-MANNOSE-6-DEHYDROGENASE-RXN GDP-MANNOSE-6-DEHYDROGENASE-RXN] == * direction: ** LEFT-TO-RIGHT *...")
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-14426 CPD-14426] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GDP-MANNOSE-6-DEHYDROGENASE-RXN GDP-MANNOSE-6-DEHYDROGENASE-RXN] ==
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* smiles:
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* direction:
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** CCC=CCC=CCC=CCC=CCC=CCCCCCC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=NDRVWKXEWNMEEO-HVGANWHPSA-J
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* common name:
 
* common name:
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** docosapentaenoyl-CoA
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** NAD(P)-binding domain
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* molecular weight:
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* ec number:
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** 1075.997   
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** [http://enzyme.expasy.org/EC/1.1.1.132 EC-1.1.1.132]
 
* Synonym(s):
 
* Synonym(s):
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** (7Z,10Z,13Z,16Z,19Z)-docosa-7,10,13,16,19-pentaenoyl-CoA
 
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** (7Z,10Z,13Z,16Z,19Z)-docosapentaenoyl-CoA
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[RXN-16082]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[GDP-MANNOSE]][c] '''+''' 2 [[NAD]][c] '''+''' 1 [[WATER]][c] '''=>''' 3 [[PROTON]][c] '''+''' 1 [[CPD-1828]][c] '''+''' 2 [[NADH]][c]
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* [[RXN-13445]]
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 GDP-α-D-mannose[c] '''+''' 2 NAD+[c] '''+''' 1 H2O[c] '''=>''' 3 H+[c] '''+''' 1 GDP-α-D-mannuronate[c] '''+''' 2 NADH[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-16_004740]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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* Gene: [[Ec-19_004880]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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* [[PWY-6082]], alginate biosynthesis II (bacterial): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6082 PWY-6082]
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** '''2''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-6073]], alginate biosynthesis I (algal): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6073 PWY-6073]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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* RHEA:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=71581114 71581114]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21731 21731]
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* CHEBI:
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* LIGAND-RXN:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=73870 73870]
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** [http://www.genome.jp/dbget-bin/www_bget?R00880 R00880]
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{{#set: smiles=CCC=CCC=CCC=CCC=CCC=CCCCCCC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]}}
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* UNIPROT:
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{{#set: inchi key=InChIKey=NDRVWKXEWNMEEO-HVGANWHPSA-J}}
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** [http://www.uniprot.org/uniprot/P11759 P11759]
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{{#set: common name=docosapentaenoyl-CoA}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: molecular weight=1075.997    }}
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{{#set: common name=NAD(P)-binding domain}}
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{{#set: common name=(7Z,10Z,13Z,16Z,19Z)-docosa-7,10,13,16,19-pentaenoyl-CoA|(7Z,10Z,13Z,16Z,19Z)-docosapentaenoyl-CoA}}
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{{#set: ec number=EC-1.1.1.132}}
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{{#set: consumed by=RXN-16082}}
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{{#set: gene associated=Ec-16_004740|Ec-19_004880}}
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{{#set: produced by=RXN-13445}}
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{{#set: in pathway=PWY-6082|PWY-6073}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:48, 21 March 2018

Reaction GDP-MANNOSE-6-DEHYDROGENASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • NAD(P)-binding domain
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 GDP-α-D-mannose[c] + 2 NAD+[c] + 1 H2O[c] => 3 H+[c] + 1 GDP-α-D-mannuronate[c] + 2 NADH[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6082, alginate biosynthesis II (bacterial): PWY-6082
    • 2 reactions found over 7 reactions in the full pathway
  • PWY-6073, alginate biosynthesis I (algal): PWY-6073
    • 2 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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