Difference between revisions of "GDP-MANNOSE-6-DEHYDROGENASE-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.6.1.7-RXN 2.6.1.7-RXN] == * direction: ** REVERSIBLE * common name: ** Aminotransferase, class I/...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GDP-MANNOSE-6-DEHYDROGENASE-RXN GDP-MANNOSE-6-DEHYDROGENASE-RXN] == * direction: ** LEFT-TO-RIGHT *...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.6.1.7-RXN 2.6.1.7-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GDP-MANNOSE-6-DEHYDROGENASE-RXN GDP-MANNOSE-6-DEHYDROGENASE-RXN] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Aminotransferase, class I/classII
+
** NAD(P)-binding domain
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.6.1.7 EC-2.6.1.7]
+
** [http://enzyme.expasy.org/EC/1.1.1.132 EC-1.1.1.132]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[CPD-14736]][c] '''<=>''' 1 [[CPD-476]][c] '''+''' 1 [[GLT]][c]
+
** 1 [[GDP-MANNOSE]][c] '''+''' 2 [[NAD]][c] '''+''' 1 [[WATER]][c] '''=>''' 3 [[PROTON]][c] '''+''' 1 [[CPD-1828]][c] '''+''' 2 [[NADH]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 2-oxoglutarate[c] '''+''' 1 L-kynurenine[c] '''<=>''' 1 4-(2-aminophenyl)-2,4-dioxobutanoate[c] '''+''' 1 L-glutamate[c]
+
** 1 GDP-&alpha;-D-mannose[c] '''+''' 2 NAD+[c] '''+''' 1 H2O[c] '''=>''' 3 H+[c] '''+''' 1 GDP-&alpha;-D-mannuronate[c] '''+''' 2 NADH[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-00_001230]]
+
* Gene: [[Ec-16_004740]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-19_004880]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6309]], L-tryptophan degradation XI (mammalian, via kynurenine): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6309 PWY-6309]
+
* [[PWY-6082]], alginate biosynthesis II (bacterial): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6082 PWY-6082]
−
** '''8''' reactions found over '''17''' reactions in the full pathway
+
** '''2''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-6073]], alginate biosynthesis I (algal): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6073 PWY-6073]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[annotation]]
−
** [[pathwaytools]]:
+
** Source: [[annotation-esiliculosus_genome]]
−
*** [[esiliculosus_genome]]
+
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20964 20964]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21731 21731]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01956 R01956]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00880 R00880]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/Q16773 Q16773]
+
** [http://www.uniprot.org/uniprot/P11759 P11759]
−
** [http://www.uniprot.org/uniprot/P47039 P47039]
+
{{#set: direction=LEFT-TO-RIGHT}}
−
** [http://www.uniprot.org/uniprot/Q08415 Q08415]
+
{{#set: common name=NAD(P)-binding domain}}
−
** [http://www.uniprot.org/uniprot/Q9XX97 Q9XX97]
+
{{#set: ec number=EC-1.1.1.132}}
−
** [http://www.uniprot.org/uniprot/Q8MP09 Q8MP09]
+
{{#set: gene associated=Ec-16_004740|Ec-19_004880}}
−
** [http://www.uniprot.org/uniprot/O14209 O14209]
+
{{#set: in pathway=PWY-6082|PWY-6073}}
−
{{#set: direction=REVERSIBLE}}
+
−
{{#set: common name=Aminotransferase, class I/classII}}
+
−
{{#set: ec number=EC-2.6.1.7}}
+
−
{{#set: gene associated=Ec-00_001230}}
+
−
{{#set: in pathway=PWY-6309}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=esiliculosus_genome}}
 

Latest revision as of 20:48, 21 March 2018

Reaction GDP-MANNOSE-6-DEHYDROGENASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • NAD(P)-binding domain
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 GDP-α-D-mannose[c] + 2 NAD+[c] + 1 H2O[c] => 3 H+[c] + 1 GDP-α-D-mannuronate[c] + 2 NADH[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6082, alginate biosynthesis II (bacterial): PWY-6082
    • 2 reactions found over 7 reactions in the full pathway
  • PWY-6073, alginate biosynthesis I (algal): PWY-6073
    • 2 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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