Difference between revisions of "RXN-16621"

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(Created page with "Category:Gene == Gene Ec-15_002020 == * left end position: ** 2325680 * transcription direction: ** NEGATIVE * right end position: ** 2329221 * centisome position: ** 43.0...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16621 RXN-16621] == * direction: ** LEFT-TO-RIGHT * common name: ** Thiolase-like, subgroup **...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Ec-15_002020 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16621 RXN-16621] ==
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* left end position:
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* direction:
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** 2325680
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** NEGATIVE
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** Thiolase-like, subgroup
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* right end position:
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** Beta-ketoacyl synthase, N-terminal
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** 2329221
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** beta-ketoacyl synthase, partial
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* centisome position:
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** 3-oxoacyl-[acyl-carrier-protein] synthase
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** 43.082085   
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* ec number:
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** [http://enzyme.expasy.org/EC/2.3.1.41 EC-2.3.1.41]
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0094_0087
 
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** Esi0094_0087
 
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[4-NITROPHENYLPHOSPHATASE-RXN]]
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* With identifiers:
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** esiliculosus_genome
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** 1 [[5Z-tetradec-5-enoyl-ACPs]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[MALONYL-ACP]][c] '''=>''' 1 [[ACP]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[7Z-3-oxo-hexadec-7-enoyl-ACPs]][c]
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***go-term
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* With common name(s):
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== Pathways associated ==
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** 1 a (5Z)-tetradec-5-enoyl-[acp][c] '''+''' 1 H+[c] '''+''' 1 a malonyl-[acp][c] '''=>''' 1 a holo-[acyl-carrier protein][c] '''+''' 1 CO2[c] '''+''' 1 a (7Z)-3-oxo-hexadec-7-enoyl-[acp][c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-12_000650]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-12_000640]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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* Gene: [[Ec-27_002090]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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* Gene: [[Ec-27_003480]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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== Pathways ==
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* [[PWY-7664]], oleate biosynthesis IV (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7664 PWY-7664]
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** '''10''' reactions found over '''14''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=2325680}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: common name=Thiolase-like, subgroup}}
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{{#set: right end position=2329221}}
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{{#set: common name=Beta-ketoacyl synthase, N-terminal}}
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{{#set: centisome position=43.082085    }}
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{{#set: common name=beta-ketoacyl synthase, partial}}
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{{#set: common name=Esi_0094_0087|Esi0094_0087}}
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{{#set: common name=3-oxoacyl-[acyl-carrier-protein] synthase}}
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{{#set: reaction associated=4-NITROPHENYLPHOSPHATASE-RXN}}
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{{#set: ec number=EC-2.3.1.41}}
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{{#set: gene associated=Ec-12_000650|Ec-12_000640|Ec-27_002090|Ec-27_003480}}
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{{#set: in pathway=PWY-7664}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:48, 21 March 2018

Reaction RXN-16621

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Thiolase-like, subgroup
    • Beta-ketoacyl synthase, N-terminal
    • beta-ketoacyl synthase, partial
    • 3-oxoacyl-[acyl-carrier-protein] synthase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7664, oleate biosynthesis IV (anaerobic): PWY-7664
    • 10 reactions found over 14 reactions in the full pathway

Reconstruction information

External links

"3-oxoacyl-[acyl-carrier-protein] synthase" cannot be used as a page name in this wiki.




Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-16621&oldid=29447"