Difference between revisions of "Ec-17 000820"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9654 RXN-9654] == * direction: ** LEFT-TO-RIGHT * common name: ** Beta-ketoacyl synthase, N-ter...")
 
(Created page with "Category:Gene == Gene Ec-17_000820 == * left end position: ** 722814 * transcription direction: ** NEGATIVE * right end position: ** 745557 * centisome position: ** 15.065...")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9654 RXN-9654] ==
+
== Gene Ec-17_000820 ==
−
* direction:
+
* left end position:
−
** LEFT-TO-RIGHT
+
** 722814
−
* common name:
+
* transcription direction:
−
** Beta-ketoacyl synthase, N-terminal
+
** NEGATIVE
−
** Thiolase-like, subgroup
+
* right end position:
−
** beta-ketoacyl synthase, partial
+
** 745557
−
** 3-oxoacyl-[acyl-carrier-protein] synthase
+
* centisome position:
−
* ec number:
+
** 15.065068   
−
** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
+
−
** [http://enzyme.expasy.org/EC/2.3.1.85 EC-2.3.1.85]
+
−
** [http://enzyme.expasy.org/EC/2.3.1.41 EC-2.3.1.41]
+
 
* Synonym(s):
 
* Synonym(s):
 +
** Esi_0016_0114
 +
** Esi0016_0114
 +
** PDGH / PAT
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[PGLYCDEHYDROG-RXN]]
−
** 1 [[MALONYL-COA]][c] '''+''' 1 [[Myristoyl-ACPs]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[3-oxo-palmitoyl-ACPs]][c]
+
** Source: [[annotation-esiliculosus_genome]]
−
* With common name(s):
+
*** Assignment: automated-name-match
−
** 1 malonyl-CoA[c] '''+''' 1 a myristoyl-[acp][c] '''+''' 1 H+[c] '''=>''' 1 CO2[c] '''+''' 1 coenzyme A[c] '''+''' 1 a 3-oxo-palmitoyl-[acp][c]
+
* Reaction: [[PSERTRANSAM-RXN]]
−
 
+
** Source: [[annotation-esiliculosus_genome]]
−
== Genes associated with this reaction  ==
+
*** Assignment: automated-name-match
−
Genes have been associated with this reaction based on different elements listed below.
+
* Reaction: [[PSERTRANSAMPYR-RXN]]
−
* [[Ec-12_000650]]
+
** Source: [[annotation-esiliculosus_genome]]
−
** ESILICULOSUS_GENOME
+
*** Assignment: automated-name-match
−
***GO-TERM
+
== Pathways associated ==
−
* [[Ec-27_003480]]
+
* [[SERSYN-PWY]]
−
** ESILICULOSUS_GENOME
+
* [[PYRIDOXSYN-PWY]]
−
***EC-NUMBER
+
−
* [[Ec-12_000640]]
+
−
** ESILICULOSUS_GENOME
+
−
***EC-NUMBER
+
−
* [[Ec-27_002090]]
+
−
** ESILICULOSUS_GENOME
+
−
***EC-NUMBER
+
−
== Pathways ==
+
−
* [[PWY-5994]], palmitate biosynthesis I (animals and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5994 PWY-5994]
+
−
** '''20''' reactions found over '''31''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[esiliculosus_genome]]
+
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: left end position=722814}}
−
{{#set: common name=Beta-ketoacyl synthase, N-terminal}}
+
{{#set: transcription direction=NEGATIVE}}
−
{{#set: common name=Thiolase-like, subgroup}}
+
{{#set: right end position=745557}}
−
{{#set: common name=beta-ketoacyl synthase, partial}}
+
{{#set: centisome position=15.065068    }}
−
{{#set: common name=3-oxoacyl-[acyl-carrier-protein] synthase}}
+
{{#set: common name=Esi_0016_0114|Esi0016_0114|PDGH / PAT}}
−
{{#set: ec number=EC-2.3.1.86}}
+
{{#set: reaction associated=PGLYCDEHYDROG-RXN|PSERTRANSAM-RXN|PSERTRANSAMPYR-RXN}}
−
{{#set: ec number=EC-2.3.1.85}}
+
{{#set: pathway associated=SERSYN-PWY|PYRIDOXSYN-PWY}}
−
{{#set: ec number=EC-2.3.1.41}}
+
−
{{#set: gene associated=Ec-12_000650|Ec-27_003480|Ec-12_000640|Ec-27_002090}}
+
−
{{#set: in pathway=PWY-5994}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=esiliculosus_genome}}
+

Latest revision as of 19:48, 21 March 2018

Gene Ec-17_000820

  • left end position:
    • 722814
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 745557
  • centisome position:
    • 15.065068
  • Synonym(s):
    • Esi_0016_0114
    • Esi0016_0114
    • PDGH / PAT

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-17_000820&oldid=29461"