Difference between revisions of "RXN0-2141"

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(Created page with "Category:Gene == Gene Ec-08_004960 == * left end position: ** 4730366 * transcription direction: ** POSITIVE * right end position: ** 4742063 * centisome position: ** 70.6...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-2141 RXN0-2141] == * direction: ** LEFT-TO-RIGHT * common name: ** Beta-ketoacyl synthase, N-t...")
 
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Ec-08_004960 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-2141 RXN0-2141] ==
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* left end position:
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* direction:
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** 4730366
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** Beta-ketoacyl synthase, N-terminal
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* right end position:
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** Thiolase-like, subgroup
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** 4742063
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** beta-ketoacyl synthase, partial
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* centisome position:
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** 3-oxoacyl-[acyl-carrier-protein] synthase
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** 70.63340   
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* ec number:
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** [http://enzyme.expasy.org/EC/2.3.1.41 EC-2.3.1.41]
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0211_0043
 
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** Esi0211_0043
 
  
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== Reactions associated ==
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== Reaction Formula ==
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* Reaction: [[3.2.1.39-RXN]]
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* With identifiers:
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** 1 [[PROTON]][c] '''+''' 1 [[MALONYL-ACP]][c] '''+''' 1 [[Cis-delta-3-decenoyl-ACPs]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[ACP]][c] '''+''' 1 [[b-Keto-cis-D5-dodecenoyl-ACPs]][c]
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* With common name(s):
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** 1 H+[c] '''+''' 1 a malonyl-[acp][c] '''+''' 1 a (3Z)-dec-3-enoyl-[acp][c] '''=>''' 1 CO2[c] '''+''' 1 a holo-[acyl-carrier protein][c] '''+''' 1 a (5Z)-3-oxo-dodec-5-enoyl-[acp][c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-27_003480]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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* Gene: [[Ec-27_002090]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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* Gene: [[Ec-12_000640]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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* Gene: [[Ec-12_000650]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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*** Assignment: GO-TERM
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* Reaction: [[3.2.1.6-RXN]]
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== Pathways  ==
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* [[PWY0-862]], (5Z)-dodec-5-enoate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-862 PWY0-862]
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** '''6''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: go-term
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*** Tool: [[pathwaytools]]
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== Pathways associated ==
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== External links  ==
 
== External links  ==
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{{#set: left end position=4730366}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=Beta-ketoacyl synthase, N-terminal}}
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{{#set: right end position=4742063}}
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{{#set: common name=Thiolase-like, subgroup}}
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{{#set: centisome position=70.63340    }}
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{{#set: common name=beta-ketoacyl synthase, partial}}
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{{#set: common name=Esi_0211_0043|Esi0211_0043}}
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{{#set: common name=3-oxoacyl-[acyl-carrier-protein] synthase}}
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{{#set: reaction associated=3.2.1.39-RXN|3.2.1.6-RXN}}
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{{#set: ec number=EC-2.3.1.41}}
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{{#set: gene associated=Ec-27_003480|Ec-27_002090|Ec-12_000640|Ec-12_000650}}
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{{#set: in pathway=PWY0-862}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:49, 21 March 2018

Reaction RXN0-2141

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Beta-ketoacyl synthase, N-terminal
    • Thiolase-like, subgroup
    • beta-ketoacyl synthase, partial
    • 3-oxoacyl-[acyl-carrier-protein] synthase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY0-862, (5Z)-dodec-5-enoate biosynthesis: PWY0-862
    • 6 reactions found over 6 reactions in the full pathway

Reconstruction information

External links

"3-oxoacyl-[acyl-carrier-protein] synthase" cannot be used as a page name in this wiki.




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