Difference between revisions of "Ec-10 001150"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=QUINOPRIBOTRANS-RXN QUINOPRIBOTRANS-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** nicotin...")
 
(Created page with "Category:Gene == Gene Ec-10_001150 == * left end position: ** 1325334 * transcription direction: ** NEGATIVE * right end position: ** 1329175 * centisome position: ** 20.3...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=QUINOPRIBOTRANS-RXN QUINOPRIBOTRANS-RXN] ==
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== Gene Ec-10_001150 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 1325334
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* common name:
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* transcription direction:
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** nicotinate-nucleotide diphosphorylase (carboxylating)
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** NEGATIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/2.4.2.19 EC-2.4.2.19]
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** 1329175
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* centisome position:
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** 20.386665   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0073_0067
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** Esi0073_0067
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[RNA-3-PHOSPHATE-CYCLASE-RXN]]
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** 1 [[PRPP]][c] '''+''' 1 [[QUINOLINATE]][c] '''+''' 2 [[PROTON]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[NICOTINATE_NUCLEOTIDE]][c] '''+''' 1 [[PPI]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 1 5-phospho-α-D-ribose 1-diphosphate[c] '''+''' 1 quinolinate[c] '''+''' 2 H+[c] '''=>''' 1 CO2[c] '''+''' 1 β-nicotinate D-ribonucleotide[c] '''+''' 1 diphosphate[c]
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== Pathways associated ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-05_000790]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-09_003390]]
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** [[pantograph]]-[[aragem]]
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* [[Ec-27_002350]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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== Pathways  ==
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* [[PWY-5653]], NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5653 PWY-5653]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-7342]], superpathway of nicotine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7342 PWY-7342]
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** '''4''' reactions found over '''13''' reactions in the full pathway
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* [[PYRIDNUCSYN-PWY]], NAD biosynthesis I (from aspartate): [http://metacyc.org/META/NEW-IMAGE?object=PYRIDNUCSYN-PWY PYRIDNUCSYN-PWY]
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** '''6''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-5316]], nicotine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5316 PWY-5316]
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** '''3''' reactions found over '''9''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[aragem]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[esiliculosus_genome]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=1325334}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12733 12733]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=1329175}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03348 R03348]
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{{#set: centisome position=20.386665    }}
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* UNIPROT:
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{{#set: common name=Esi_0073_0067|Esi0073_0067}}
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** [http://www.uniprot.org/uniprot/Q9JSX8 Q9JSX8]
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{{#set: reaction associated=RNA-3-PHOSPHATE-CYCLASE-RXN}}
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** [http://www.uniprot.org/uniprot/Q57916 Q57916]
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** [http://www.uniprot.org/uniprot/P30011 P30011]
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** [http://www.uniprot.org/uniprot/P46714 P46714]
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** [http://www.uniprot.org/uniprot/Q15274 Q15274]
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** [http://www.uniprot.org/uniprot/P77938 P77938]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=nicotinate-nucleotide diphosphorylase (carboxylating)}}
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{{#set: ec number=EC-2.4.2.19}}
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{{#set: gene associated=Ec-05_000790|Ec-09_003390|Ec-27_002350}}
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{{#set: in pathway=PWY-5653|PWY-7342|PYRIDNUCSYN-PWY|PWY-5316}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=aragem}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=esiliculosus_genome}}
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Latest revision as of 19:49, 21 March 2018

Gene Ec-10_001150

  • left end position:
    • 1325334
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 1329175
  • centisome position:
    • 20.386665
  • Synonym(s):
    • Esi_0073_0067
    • Esi0073_0067

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-10_001150&oldid=29583"